Bacillus amyloliquefaciens IT-45: KSO_016265
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Entry
KSO_016265 CDS
T02462
Name
(GenBank) PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bami
Bacillus amyloliquefaciens IT-45
Pathway
bami03420
Nucleotide excision repair
bami03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bami00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KSO_016265
03430 Mismatch repair
KSO_016265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bami03400
]
KSO_016265
Enzymes [BR:
bami01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KSO_016265
DNA repair and recombination proteins [BR:
bami03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KSO_016265
MMR (mismatch excision repair)
Other MMR factors
KSO_016265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
Terminase_6N
AAA_11
Com_YlbF
ResIII
Motif
Other DBs
NCBI-ProteinID:
AGF28740
LinkDB
All DBs
Position
complement(3276738..3278957)
Genome browser
AA seq
739 aa
AA seq
DB search
MNYISNQLLSGLNPVQQEAVKTTDGPLLLMAGAGSGKTRVLTHRIAYLMAEKHVAPWNIL
AITFTNKAAREMKERVESILGPGADEIWISTFHSMCVRILRRDIDRIGINRNFSILDTAD
QLSVIKGILKERNIDPKKFDPRSILGSISSAKNELIEPEEFAKTAGGYYDQVTSDVYTDY
QKKLLKNQSLDFDDLIMTTIKLFERVPEVLEFYQRKFQYIHVDEYQDTNRAQYLLVKQLA
ARLENICVVGDSDQSIYRWRGADIANILSFEKDYPSANVILLEQNYRSTKRILQAANEVI
KNNSNRKPKNLWTENDEGIKLSYYSGDNEFGEGQFVAGKIYELHSSGRRKLSDIAILYRT
NAQSRVIEETLLKSGLNYNIVGGTKFYDRKEIKDILAYLRLVSNPDDDISFTRIVNVPKR
GVGATSLEKIASYAAMNGMSMFQAIKQVDFIGVSAKAANALDGFGAMIENLTNMQDYLSI
TELTEEILEKTEYREMLKAEKSIEAQSRLENIDEFLSVTKNFEQKSEDKSLVAFLTDLAL
IADIDQLDQKEEEAGGKDAVTLMTLHAAKGLEFPVVFLMGMEEGVFPHSRSLMEEAEMEE
ERRLAYVGITRAEEELYLTNAKMRTLFGRTNMNPESRFIREIPGDLLENLNEKKTPRMQP
GRKVQPKRGPVSRPVSYANKTGGDSLSWAVGDKAGHKKWGTGTVVSVKGEGESTELDIAF
PSPVGVKRLLAAFAPIEKQ
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgaattacattagcaatcaattattaagcggattaaatcccgttcagcaggaagcggtc
aagacgacggacggtccgctgcttctgatggcgggcgcgggaagcggaaaaacacgtgtg
ctgacgcacagaatcgcatacttaatggcggaaaaacacgtggcgccatggaacattctg
gcgattacatttacaaataaagccgccagagaaatgaaggagcgggtggagagcattctc
ggacccggcgcggatgaaatctggatttccaccttccacagcatgtgcgtgcggattctg
cgcagggatattgacagaatcggcatcaaccgaaacttctccattcttgatacggctgat
cagctttccgttattaaagggattttgaaagagcggaatatcgatccgaaaaagtttgat
ccgagaagtattttaggctccatcagcagcgcaaaaaacgagctgatcgaacctgaggaa
ttcgcaaaaacggccggcggctactacgatcaggtcacgagtgacgtgtataccgattat
cagaaaaaactgctgaaaaaccaatcgctcgattttgatgatttaatcatgacgacgatt
aagctttttgagcgtgtgccggaagtgcttgagttttatcagcgcaaatttcagtacatt
cacgtagacgagtatcaggatacgaacagggcgcaatacctccttgtgaagcagcttgcg
gcccgtcttgaaaatatctgcgtcgtcggtgactccgaccagtccatttacagatggcgc
ggggcggatatcgcgaatatcctttcctttgaaaaagattacccgagcgcaaacgtgatt
ctgctcgagcaaaactaccgctcaacaaagcggattctgcaggcggctaacgaagtgatc
aaaaacaactcaaaccgcaagccgaaaaacctgtggacggaaaatgacgaaggcatcaag
ctttcttattacagcggcgacaatgaattcggcgaaggccaattcgtcgcgggcaaaatt
tatgagctgcacagctcgggccggcggaagctttccgatatcgcaattttataccggaca
aacgcccagtcgcgcgtcattgaggaaacccttttaaaatccggtctgaactacaatatc
gtcggcggaaccaagttctacgacaggaaagaaattaaagacattcttgcatacctgcgc
cttgtgtcaaacccggacgatgacatcagttttacgcggatcgtcaatgtgccgaagcgt
ggcgtcggcgccacttcgctagaaaaaatcgcgtcatatgcggcgatgaacggaatgtca
atgttccaggcgatcaaacaggttgatttcatcggcgtcagcgcaaaagcggcaaacgcg
cttgacggctttggcgcgatgattgaaaatctgacgaacatgcaggattacctgtccatt
acggaactcacggaagaaattctcgagaaaacggaatacagagaaatgctgaaggccgaa
aaatcaatcgaagcccaaagccgccttgaaaatatcgacgagtttctttccgtgacgaaa
aacttcgaacaaaaaagcgaagacaagtctctcgtcgcgtttctgaccgatctggcgctg
atcgcggatattgaccagctcgaccagaaggaagaagaagcaggcggaaaggatgccgtc
actttaatgacactgcacgccgctaaggggcttgaatttccagtcgtgttcttaatgggc
atggaagaaggcgtgttcccgcacagccgctccctgatggaagaagccgagatggaagaa
gaacgcaggctcgcatatgtaggcattacgagggcggaagaagaactgtatttaacgaat
gccaaaatgcgaaccttattcggccgcaccaatatgaatccggaatcccgctttatcagg
gaaatacctggcgatttattggagaacctaaatgagaagaaaacacctcgcatgcagccg
ggaagaaaagtgcagccgaaacgcgggcccgtatcccgtcccgtttcctatgcgaacaaa
acaggcggcgactcgctcagctgggcggtcggcgataaagcgggccataaaaaatggggc
accggaacggttgtcagcgtaaaaggagaaggcgaaagcaccgagcttgatatcgcattc
ccgagcccagtcggcgtgaagcgtctgcttgccgcttttgcgccgattgaaaagcagtaa
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