Bacillus velezensis SQR9: V529_15520
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Entry
V529_15520 CDS
T03384
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bamy
Bacillus velezensis SQR9
Brite
KEGG Orthology (KO) [BR:
bamy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bamy03032
]
V529_15520 (topA)
03400 DNA repair and recombination proteins [BR:
bamy03400
]
V529_15520 (topA)
Enzymes [BR:
bamy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
V529_15520 (topA)
DNA replication proteins [BR:
bamy03032
]
Prokaryotic type
DNA Topoisomerases
V529_15520 (topA)
DNA repair and recombination proteins [BR:
bamy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
V529_15520 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
RNA_POL_M_15KD
Toprim_4
Toprim_3
Motif
Other DBs
NCBI-ProteinID:
AHZ15578
LinkDB
All DBs
Position
1623092..1625167
Genome browser
AA seq
691 aa
AA seq
DB search
MSDYLVIVESPAKAKTIERYLGKKYKVKASMGHVRDLPKSQMGVDIEQNFEPKYITIRGK
GPVLKELKTAAKKAKKVYLAADPDREGEAIAWHLAHSLDLDLSSDCRVVFNEITKDAIKE
SFKHPRMINMDLVDAQQARRILDRLVGYKISPILWKKVKKGLSAGRVQSVALRLIIDREK
EINDFKPEEYWTITGSFLKGKETFEAGFFGKNGKKLPLKSEEDVKAILAQLKGNKYTVDK
VTKKERKRNPALPFTTSTLQQEAARKLNFRAKKTMMIAQQLYEGIDLGKEGTVGLITYMR
TDSTRISNTAVEEASAFIDQAYGKEYLAGKRKPAKKNENAQDAHEAIRPTSVLRKPADLK
AVLGRDQLRLYKLIWERFVASQMAPAVLDTMSVDLSNNGLTFRANGSKVKFAGFMKVYVE
GKDDQLEEKDRMLPDLKEGDTVLSKDIEPEQHFTQPPPRYTEARLVKTLEELGIGRPSTY
APTLDTIQRRGYVGLDNKRFVPTELGQIVLDLIMEFFPEIINVEFTAKMERDLDHVEDGQ
TEWVQIIDSFYTDFEKRVKKAEAEMKEVEIEPEYADEDCELCGSRMVYKMGRYGKFMACS
NFPDCRNTKPIVKQIGVKCPKCHEGNIVERKSKKKRIFYGCDRYPECDFVSWDKPIERKC
PKCENMLVEKKLKKGIQVQCVECDYKEEPQK
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattatctagtcatcgtggaatcgccggcaaaggcgaaaacgattgaacgttat
ttagggaagaaatataaagtcaaagcttcaatgggacatgtccgggatcttccgaaaagt
caaatgggagttgacatcgaacagaactttgaaccgaaatatattacgatccgcggaaaa
ggccctgttttaaaagaattaaaaacagcggcaaagaaagcaaaaaaagtctatctcgcg
gccgaccccgatagagaaggggaagcgattgcatggcatctcgcacacagccttgatctg
gatctcagctcggactgccgggtcgtctttaatgaaataacgaaagacgccattaaagaa
tcatttaaacatccgcgcatgattaatatggatcttgtcgatgcgcagcaggcgcgccgc
atactagacagactcgtcggatacaaaatcagcccgattctttggaaaaaagtaaaaaaa
ggcctcagtgcgggccgtgtgcaatccgttgcgctccggctgatcatcgaccgggaaaag
gaaatcaatgactttaaacctgaagagtactggacgattaccggctcatttttaaaggga
aaagagacgtttgaagccggatttttcggaaaaaacggcaaaaagcttcctttaaaaagc
gaagaagacgtaaaagccatccttgctcagctgaaaggcaataagtatacagttgacaag
gttacgaaaaaagagcgcaaacgaaatcccgctctgccgtttacaacgtccactctgcag
caggaggctgcaagaaagctgaatttcagagcgaagaaaacgatgatgatcgctcagcaa
ttatatgaaggaattgatctcggcaaagaagggacagtcgggctcatcacgtatatgaga
acggactcaacgcggatttccaatacagccgttgaagaagcgtcagcttttattgatcag
gcgtacggaaaagagtacttagcgggaaaacggaaaccggcaaagaaaaatgaaaacgct
caagatgcccacgaagcgatccgcccgacttcggtgctcagaaaacctgccgacttaaaa
gcggtgcttggaagagaccagctcagattatacaagctgatttgggagcgctttgttgca
agccagatggcgcctgccgtccttgatacgatgagcgtcgatctcagcaataacggattg
acattccgggcaaacggaagtaaagtcaaattcgccggcttcatgaaagtctatgtagag
ggtaaagacgatcagctggaagaaaaagaccgcatgcttccggaccttaaagagggagac
acggttttatcgaaagatattgagcctgagcagcactttactcagccgcctccgcgttat
acagaggcgcgcctggttaaaacgcttgaagaactggggatcggccgtccttcgacatat
gcgccgactcttgacaccatccagcgccgcggttacgtgggattagacaataaacggttt
gtgccgactgagcttgggcagatcgtgctggatcttatcatggagtttttcccggaaatc
attaacgttgaattcacggctaaaatggaaagagaccttgaccatgttgaagatggccag
acagaatgggttcaaatcattgacagcttctatactgatttcgaaaaacgcgtgaaaaaa
gcggaagccgaaatgaaagaagtggaaattgaacctgaatacgccgatgaagattgtgag
ttatgcggctcccggatggtttataaaatgggccgatacggcaaatttatggcgtgctcc
aacttccctgactgccggaatacaaaaccgattgtcaaacaaatcggcgtaaaatgtcct
aagtgccatgaaggaaacattgtcgaacgaaaatcaaaaaagaaacgcatcttttacggc
tgtgaccgttatcctgaatgcgacttcgtatcttgggacaaaccgattgaacgaaaatgc
ccgaaatgtgaaaatatgctcgtagagaaaaagcttaaaaaaggcatacaagtccaatgc
gtcgaatgcgattataaggaagaaccacagaagtag
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