Bacillus amyloliquefaciens DSM 7: BAMF_1773
Help
Entry
BAMF_1773 CDS
T01321
Symbol
ymcB
Name
(GenBank) putative conserved AdoMet radical enzyme for tRNA modification
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
bao
Bacillus amyloliquefaciens DSM 7
Brite
KEGG Orthology (KO) [BR:
bao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bao03016
]
BAMF_1773 (ymcB)
Enzymes [BR:
bao01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
BAMF_1773 (ymcB)
Transfer RNA biogenesis [BR:
bao03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
BAMF_1773 (ymcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
DUF3079
Motif
Other DBs
NCBI-ProteinID:
CBI42899
UniProt:
A0A9P1JH40
LinkDB
All DBs
Position
1777509..1779038
Genome browser
AA seq
509 aa
AA seq
DB search
MNEKQKQESGQVNPADKKSEKDYSKYFEAVYIPPSLKDAKKRGKESVQYHNDFKISEEFK
GLGEGRKFYIRTYGCQMNEHDTEVMAGIFMALGYEATNSVDDANVILLNTCAIRENAENK
VFGELGHLKALKKNNPDLILGVCGCMSQEESVVNRILKKHPFVDMIFGTHNIHRLPELLS
EAYLSKEMVIEVWSKEGDVIENLPKVRNGKIKGWVNIMYGCDKFCTYCIVPYTRGKERSR
RPEEIIQEVRRLASEGYKEITLLGQNVNAYGKDFEDITYGLGDLMDELRKIDIPRIRFTT
SHPRDFDDHLIEVLAKGGNLLDHIHLPVQSGSSAMLKMMARKYDRERYLELVGKIKAAMP
NASLTTDIIVGFPNETDEQFEETLSLYREVEFDSAYTFIYSPREGTPAAKMKDNVPMRVK
KERLQRLNDLVKEISAKKMKEYEGRTVEVLVEGESKNNPDILAGYTEKSKLVNFKGPKDA
IGKIVRVKIEQAKTWSLDGVMAGEAIEVK
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaagcaaaagcaggaaagcggacaagtaaatccagcggacaaaaaatccgaa
aaggattacagcaagtatttcgaagccgtatatattccgccttcattaaaagatgcgaaa
aaacggggcaaagaatccgttcaatatcataacgattttaaaatctcagaagaatttaaa
ggcctcggggaaggcaggaagttttatatccgcacttacggatgtcagatgaatgagcat
gatacggaagtcatggcaggtatttttatggcgcttggatatgaagcgacaaattcagtt
gatgatgcgaatgtcattttattaaacacctgcgccatccgggaaaatgctgaaaacaaa
gtgttcggcgaactcggccatttaaaagcgctcaaaaaaaataacccggacctgattctg
ggcgtatgcggctgtatgtcacaagaagaatcagtcgtaaaccgcatccttaagaagcac
ccgtttgtcgatatgattttcggcacgcacaacattcaccgtctgccggaactgttatca
gaggcatacttatcaaaagagatggtgattgaagtgtggtcgaaggaaggggatgtcatt
gaaaaccttccgaaggtccgcaacggcaaaattaagggctgggtcaacatcatgtacggc
tgtgataaattctgcacatactgcatcgtgccgtatacccgcggaaaagaacgaagccgc
cgtcctgaagaaattatccaggaagtcagaagacttgcaagcgaaggttataaagaaatc
acgctgctcggtcaaaacgttaatgcgtacggaaaagattttgaggacataacgtacgga
ctcggtgatttaatggacgaactgcgtaaaattgatattccgagaatccgtttcacgaca
agccatccgcgtgactttgatgaccatctgatcgaagtgctcgccaaaggcggcaacctg
cttgaccatatccatcttccggttcaatcaggaagctcggccatgttaaaaatgatggcg
cgcaaatatgacagagaacgctatctggagcttgtcggaaaaattaaagcggcgatgccg
aacgcttcactcactaccgatatcattgtcggtttcccgaatgaaaccgatgaacagttt
gaggaaaccctttctttatatcgtgaagtggaatttgacagcgcgtatacgtttatttac
tctcctcgtgaaggcacgcctgcggcgaagatgaaagacaacgttccgatgagggtcaag
aaagaacgtcttcagcgcctcaatgatttggtgaaagaaatttccgccaaaaaaatgaag
gaatatgaaggccggactgtcgaagtattagttgagggagaaagcaaaaataaccctgac
attcttgccggctatacggaaaaaagcaagctcgtcaacttcaaagggccgaaagacgcc
atcggcaagattgtacgcgtcaaaatcgaacaggcgaaaacatggtcgcttgacggtgtg
atggcaggagaagcaatcgaggtgaaataa
DBGET
integrated database retrieval system
