Buchnera aphidicola USDA (Myzus persicae): BUMPUSDA_CDS00476
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Entry
BUMPUSDA_CDS00476 CDS
T03022
Symbol
nth
Name
(GenBank) Nth
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
bapu
Buchnera aphidicola USDA (Myzus persicae)
Pathway
bapu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bapu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BUMPUSDA_CDS00476 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bapu03400
]
BUMPUSDA_CDS00476 (nth)
Enzymes [BR:
bapu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BUMPUSDA_CDS00476 (nth)
DNA repair and recombination proteins [BR:
bapu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BUMPUSDA_CDS00476 (nth)
Prokaryotic type
BUMPUSDA_CDS00476 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AHG60251
UniProt:
W0P0H1
LinkDB
All DBs
Position
123076..123711
Genome browser
AA seq
211 aa
AA seq
DB search
MNKEKRYKILSLFYDNNPNPKIELIFSSDFELLLSVILSAKSTDKIVNKTTKILFKIANT
PQSILCLGIECLKKYIRNIGLYNSKALNIIRTSFLIIYKYNGKIPKDRIELESLPGVGRK
TANIILNTLFKKDTIAVDTHVFRVSNRTNFAKGKNTKEVENKLIKVVPTIFKSKMHLWFV
FHGRYICTARKIKCNMCLIVRLCEFNKKTLK
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagaaaaacgttataaaatattatcattgttttatgataataatccaaatccg
aaaatagaattaattttttcttccgattttgaattattattatcagtgatattatcagca
aagtctactgacaaaatagttaataaaactactaaaatattatttaaaattgcaaatact
ccacaaagcattttatgtctagggatcgaatgtcttaaaaaatatattagaaatattggg
ttatataattctaaagcattaaatattatacgtacttcttttttaataatatataaatat
aatggaaaaattcctaaagatcgtattgaattagagtctttacctggtgtgggaagaaaa
acagctaatattattttaaatactttatttaaaaaagatactattgccgtggatactcat
gtttttagagtttctaatcgtactaattttgctaaaggtaaaaatacaaaagaagttgag
aataaattaataaaagtagttcctactatttttaaatctaaaatgcatttatggtttgtt
tttcatggtcgttatatttgtactgcacgtaaaattaaatgcaatatgtgtttaatagtt
agattatgtgaatttaataaaaaaactttgaaatag
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