KEGG   Bacillus anthracis Ames Ancestor: GBAA_0103
Entry
GBAA_0103         CDS       T00178                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
bar  Bacillus anthracis Ames Ancestor
Pathway
bar03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    GBAA_0103 (rpoC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bar03021]
    GBAA_0103 (rpoC)
   03400 DNA repair and recombination proteins [BR:bar03400]
    GBAA_0103 (rpoC)
Enzymes [BR:bar01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     GBAA_0103 (rpoC)
Transcription machinery [BR:bar03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     GBAA_0103 (rpoC)
DNA repair and recombination proteins [BR:bar03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      GBAA_0103 (rpoC)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_3 RNA_pol_Rpb1_2 RNA_pol_Rpb1_4 RPOC_hybrid
Other DBs
NCBI-ProteinID: AAT29183
UniProt: P77819
LinkDB
Position
111989..115573
AA seq 1194 aa
MKIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPQKDWECHCGKYKRVR
YKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDMSPRALEEVI
YFASYVVTESGDTPLDKKQLLSEKEYRAYRDRYGSTFQAAMGAEAIKKLLQDIDLDKEVD
FLKEELKTAQGQRRTRAIKRLEVLEAFRNSGNEPSWMILDVLPVIPPELRPMVQLDGGRF
ATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGRRGRPVTGPG
NRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKEMALELFKPF
VMKELVEKGLAHNIKSAKRKIERVQPEVWDVLESVIKEHPVLLNRAPTLHRLGIQAFEPT
LVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSSEAQAEARLLMLAAQNILNPKDGKPVV
TPSQDMVLGNYYLTLEREGAIGEGMVFKDANEALLAYQNGYVHLHTRVAVAASAVNNVTF
TEEQKNMLLLTTVGKLIFNEILPESFPYINEPTNSNLEKETPAKYFVEKGANIKEIIASR
EEVAPFSKKILGNIIAEVFKRFKITETSRMLDRMKNLGFKYSTKAGITVGVSDILVLGEK
DEILHEAQAKVDNVIKQFRRGLITEEERYDRVISIWSNAKDVIQGKLMKSLNKRNPIFMM
SDSGARGNASNFTQLAGMRGLMANPSGRIIELPIKSSFREGLTVLEYFISTHGARKGLAD
TALKTADSGYLTRRLVDVAQDVIVREDDCGTDRGLLIGAIKEGNEVIESLYDRLVGRFAR
KTVKHPETGEVLVAENQLITEDIAHIVENSGVETVNIRSAFTCNTRHGVCKKCYGRNLAT
GTDVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIFEARNPKGQA
VISEIDGVIAAINDVKDRQEVVVQGEVEARTYAIPYGARLKVIPGQKISHGKELTEGSID
PKELLKVTDITAVQEYLLREVQKVYRMQGVEIGDKHVEVMVRQMLRKVRVSDAGETDVLP
GTLLDIHQFTDANAKVLLQGKQPATARPVLLGITKASLETDSFLSAASFQETTRVLTDAA
IKGKRDELLGLKENVIIGKLVPAGTGMNRYRKVDLVKTTQDDMNVENDEVYVEQ
NT seq 3585 nt   +upstreamnt  +downstreamnt
atgaagattggacttgcttcacctgacaagattcgttcttggtcatacggtgaagttaag
aaaccagaaacaattaactatcgtacgttaaagcctgaaaaagatggcttgttctgtgag
cgtattttcggaccacaaaaggactgggaatgtcattgcggaaaatacaaacgtgtacgt
tataaaggtgtagtttgtgatcgatgtggcgttgaagtaacgcgtgcgaaagtacgtcgt
gaacgtatgggtcatatcgaattagctgctcctgtatctcatatttggtatttcaaaggt
atcccgagccgcatgggacttgtcttagacatgtcccctcgcgcgcttgaagaagtaatt
tatttcgcttcttatgttgtaacagaaagtggagatacaccacttgataagaagcaatta
ctttctgaaaaagaataccgtgcatatcgtgatcgatatggtagcacattccaagctgct
atgggtgcagaagcgattaaaaagctattacaagacatcgatttagataaagaagtagac
ttcttaaaagaagaattaaaaacagcacaaggacaacgccgtactcgtgctattaaacgt
ctagaagtattagaagcattccgtaactctggaaatgagccatcttggatgatcttagat
gttctaccagtaatcccaccagaactacgaccaatggtacagttagatggtggacgtttt
gctacttctgacttaaacgacttataccgtcgtgtaattaaccgtaacaaccgtttaaaa
cgtctattggacttaggtgcaccaagcattatcgttcaaaacgaaaaacgtatgttacaa
gaagctgtagacgcattaatcgataatggtcgtcgtggccgtccagttactggaccgggt
aaccgtccattaaaatctctatctcacatgcttaaaggtaaacaaggacgtttccgtcaa
aacttattaggtaagcgtgttgactactctggtcgttctgtaatcgttgtaggaccgaac
ttaaagatgtatcaatgtggattaccgaaagagatggcgcttgaactgttcaaacctttc
gtaatgaaagagttagttgaaaaaggattagcacacaacattaagagtgcgaaacgtaaa
atcgagcgtgtacaacctgaagtttgggacgttttagaatctgtgattaaagaacatcca
gtacttctaaaccgcgcaccaacacttcaccgtcttggtattcaggcgtttgaacctaca
ttagtagaaggtcgcgcaatccgtcttcacccacttgtatgtactgcatacaacgcggac
tttgacggtgaccaaatggccgttcacgtacctttatcatcagaagcgcaagcagaagct
cgtcttcttatgttagcggcacaaaacatcttgaacccgaaagacggtaaaccagttgtt
actccatctcaggatatggtattaggtaactactacttaacacttgagcgtgaaggtgca
atcggtgaaggtatggtcttcaaagatgcgaacgaagcattacttgcatatcaaaatgga
tatgtacatcttcatacgcgtgttgcagtagctgcaagtgcagtaaacaacgtaacattt
actgaagagcaaaagaatatgcttctattaacaacagttggtaaattaatatttaacgaa
atcttaccagagtcgttcccttatattaatgaaccaacaaattcaaaccttgaaaaagaa
acaccagcgaaatatttcgttgaaaaaggtgcgaacattaaagagattattgctagtcgc
gaagaagtggcaccattcagcaagaaaatccttggtaacatcattgcggaagtgtttaaa
cgtttcaaaattacagaaacgtctcgcatgcttgaccgtatgaaaaacttaggattcaag
tactctacaaaagctggtattacagttggggtatctgacattcttgtattaggtgaaaaa
gatgaaattctccacgaagcacaagcaaaagtagataatgtaattaaacaattccgtcgc
ggtttaatcacggaagaagaacgttacgatcgcgttatctctatttggagtaatgcaaaa
gatgttatccaaggaaaactgatgaagtccttgaataaacgcaacccaatcttcatgatg
agtgattccggtgcccgtggtaacgcatcgaactttactcagcttgctggtatgcgtggt
ctgatggccaatccatctggtcgtatcatcgaacttccaatcaaatcaagtttccgtgaa
ggtttaacagtacttgagtacttcatctctacgcatggtgcgcgtaaaggtcttgccgat
acagcactgaaaactgccgattctggttacttaacacgtcgtcttgttgacgttgcacaa
gatgtaatcgttcgtgaagatgattgtggaacagatcgcggtttattaattggtgcgatt
aaagagggtaatgaagttattgagtcattatatgatcgtcttgttggacgttttgcaaga
aaaactgtaaaacatcctgaaacaggtgaagtattagttgctgaaaatcaattaattact
gaagatatcgctcatattgttgaaaactcgggtgttgaaactgtaaacattcgttcagcg
tttacgtgtaacactcgccatggtgtatgtaagaagtgttacggtcgtaacttagcaact
ggaacagacgtagaagtaggggaagcggtaggtattatcgcagctcaatctatcggtgag
ccaggtacacagttaacgatgcgtacgttccatacaggtggggttgccggagatgatatc
actcaaggtttacctcgtatccaagagatcttcgaagctcgtaatccgaaaggtcaggct
gttatcagtgaaatcgacggtgttatcgcagcgatcaacgatgttaaagatcgccaagaa
gtagttgtacagggtgaagttgaagctcgtacgtatgctattccttatggtgctcgtctg
aaagtaattccaggacagaaaattagccacggtaaagagttaacagaaggttctattgat
ccgaaagaattactaaaagtaacagacattacggcagttcaagaatacttattacgtgaa
gttcaaaaagtataccgtatgcaaggggtagaaattggtgacaaacacgtagaagtaatg
gtacgccaaatgttacgtaaagtacgtgtgagtgatgcaggtgaaacagatgtattacca
ggaacattactagatatccatcagtttactgatgcgaatgcgaaggtgttactgcaaggt
aaacaaccagcaacagctagacctgttctacttggtattacaaaagcttcacttgaaaca
gattcattcttatctgcagcatcgttccaagaaacaactcgtgtcttaactgatgcagcg
attaagggtaaacgcgatgagcttctaggattgaaagaaaatgttattatcggtaaactt
gttcctgctggaacaggtatgaatcgttatcgcaaagtggatcttgttaaaactacacaa
gatgacatgaatgtagaaaacgatgaagtttatgtggaacagtaa

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