Bdellovibrio bacteriovorus HD100: Bd3339
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Entry
Bd3339 CDS
T00159
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bba
Bdellovibrio bacteriovorus HD100
Pathway
bba03420
Nucleotide excision repair
bba03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Bd3339 (pcrA)
03430 Mismatch repair
Bd3339 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bba03400
]
Bd3339 (pcrA)
Enzymes [BR:
bba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bd3339 (pcrA)
DNA repair and recombination proteins [BR:
bba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bd3339 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
Bd3339 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_14
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
CAE78146
UniProt:
Q6MI36
LinkDB
All DBs
Position
3249944..3252232
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AA seq
762 aa
AA seq
DB search
MDVLDFVTKNLNPAQKDAVETLEGPLLILAGAGSGKTRVLTHRMANMIGQGVAASDEILC
VTFTNKAAKEMEHRIYKILSDMGAVVQTQLWISTFHSFCVRVLRQHITLLDYKPFFGIYD
SSDQLSQIKKVMTALDINDKMYPAKNFQSRISSAKMMGLSPEGLEKSSKRLMDQKTVEVY
KAYEREMKKANSLDFDDLLLKTYDLFRMYPDVLQMYQKKFRYIMVDEYQDTNHIQYLLVQ
MLASAHRNLCVVGDEDQSIYSWRGADIKNILDFEKDFRDAKVIKLEENYRSSANIVNGAT
AVIKNNSQRKDKTLFTSNDPGDLIHVREEKNEYEEGRFVAKTIQSMMNEGEGSYNDYAIF
YRTNAQSRVLEEQLRTMGIPYRLVGGVRFYERMEIKDMISYLKLSINPADDIALKRIINV
PARGIGKTTIEKIEEYAAHKNLSMFEAAEKACEERLFNAGTTGKIRRFIDLMKDLQQNAQ
HLKLLEFFAVVLDRTEYLAALKKDESPESQARIENLEELDNAIAQFVQERGEESTLISFL
EEMALVNDVDSLDQEQNSVTMMTLHISKGLEYPYVFVVGLEENLFPSARSAESDNEQDVE
EERRLAYVGMTRARQKLWLTYAKMRRVWGQEQFNPPSRFIKEIPQNLIDFKTSAEAPRFM
ARYGSSSYDSDFGGTPKWGATSSDRNRARTQSYDDAQDFPDYENDGAGSAPFSKGMRVRH
PTFGVGTVYATEGTGENFKVSVMFTDNTVKKFVVKYARLERV
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggatgtacttgattttgttacgaaaaatctgaaccccgcgcagaaggatgccgtcgaa
accctggaagggcctttgcttatccttgccggcgccggttcgggcaaaactcgcgtgctc
acccaccgcatggccaacatgatcggccagggggtcgcggcttccgacgaaatcctgtgt
gtgacctttaccaataaggccgccaaagagatggaacatcgtatttacaagattctgtcg
gacatgggcgccgtggtccaaacccagctttggatcagcacattccacagcttctgcgtt
cgtgttctgcgccagcacatcacacttctggattacaagcccttcttcggtatctatgat
tcctccgatcagctcagccagatcaagaaagtcatgaccgcgctggatattaacgacaag
atgtatcccgcgaaaaacttccagagccgtatcagcagcgccaagatgatgggtctttcc
ccggaaggtttggaaaaatcctcgaagcgtttgatggatcaaaagaccgtggaagtttac
aaagcctatgagcgcgaaatgaaaaaggccaacagccttgatttcgatgatctgcttttg
aaaacctatgatctgttccgcatgtacccagatgttctgcagatgtatcagaaaaaattc
cgctacatcatggtggacgagtaccaggacaccaatcacattcagtaccttctggtgcag
atgctggcttccgctcaccgcaacttgtgcgtagtgggtgacgaggatcagtcgatctac
agctggcgtggggccgacatcaaaaacatcctggattttgaaaaagacttccgtgatgcg
aaggtgatcaagcttgaggaaaattaccgatccagcgccaacatcgtcaatggcgccacg
gccgtaatcaaaaacaactcgcaacgcaaagacaaaactcttttcacatcgaacgatccg
ggtgatctgattcacgtgcgcgaggaaaagaacgagtacgaagaaggccgctttgtcgcc
aagaccattcagtcgatgatgaatgagggcgaaggctcttacaacgactatgcgatcttc
tatcgcaccaatgcccagtcgcgcgttctggaagaacagctgcgcaccatgggcattccg
tatcgcctggtgggcggcgtgcgcttctatgaacgcatggaaatcaaagacatgatttcc
tacctgaagctgtccatcaatccggcggatgatatcgccttaaagcgcatcatcaacgtt
ccagcccgcggtatcggcaaaaccacgattgaaaaaatcgaagaatacgcggctcataaa
aacttgagcatgttcgaagcggccgaaaaagcctgcgaagagcgcctgttcaatgccggc
accaccggcaagatccgtcgttttatcgacctgatgaaagaccttcagcaaaacgcccag
catctgaaactgctggaattctttgccgtggttctggatcgcacggaatatctggcggct
ttgaaaaaagacgaatctccggaatcccaggcgcgcatcgaaaacttggaggaactggac
aacgccattgcccagttcgtgcaagagcgcggtgaagaatccacactgatcagcttcctg
gaagaaatggctttggttaacgatgtcgattctttggatcaggagcagaattcagtgacc
atgatgaccctgcacatctccaagggtcttgagtatccgtacgtgtttgtggtggggctt
gaagaaaatctgttcccaagtgcgcgcagcgcagaaagcgacaacgagcaggatgtcgag
gaagagcgccgcctggcttacgtgggcatgactcgcgctcgtcagaagctgtggctgacc
tatgcgaaaatgagacgcgtgtggggccaggagcagttcaatcctccgtcgcgattcatt
aaggaaatcccgcagaatctgatcgactttaaaacgtccgccgaagcgccgcgctttatg
gcccgctatggttccagctcttatgactctgactttggcggcacgccgaaatggggcgcc
actagcagcgatcgcaaccgcgcacgcacacaaagttacgatgatgcacaagacttcccg
gattacgaaaatgacggggccggctctgcacccttttccaaaggtatgcgcgtcagacac
ccgacgtttggtgtcggcaccgtgtatgccacggaaggcactggcgaaaacttcaaagtc
agcgtgatgttcacggataacaccgtgaagaaattcgttgtgaagtacgcccgcctggag
cgcgtgtag
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