Bordetella bronchiseptica 253: BN112_0963
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Entry
BN112_0963 CDS
T02344
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor 70
KO
K03086
RNA polymerase primary sigma factor
Organism
bbh
Bordetella bronchiseptica 253
Pathway
bbh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bbh00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BN112_0963 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbh03021
]
BN112_0963 (rpoD)
Transcription machinery [BR:
bbh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BN112_0963 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
SPO22
GerE
TMPIT
Motif
Other DBs
NCBI-ProteinID:
CCJ52881
UniProt:
A0A0C6P099
LinkDB
All DBs
Position
complement(1025368..1027536)
Genome browser
AA seq
722 aa
AA seq
DB search
MKVAKPAAKTAAKKAATKTVAAKTAAADKPAKTTKARAKKAEDKLADLVGAARPAPSGRR
PGRPAKNANNDSDAFDDSMDGEGEVLPDLKPPKRGGKRGKADPKDLIARGPVTPEEYEAR
RNRLKQLIKLGKDRGYLTYGEINDHLPDDLVDAEAIDGIISTFSDMGIAVYDQAPDAETL
LMSENAPVASNDDDVEDEAEAALTTVDSDFGRTTDPVRMYMREMGSVELLTREGEIEIAK
RIEDGLKHMVMAISACPTTINEILAHILRVREGQAQIDEVVDGLVDPEDGEEYAGAGVTA
DEDEGDDGPAGGMSSKQLEDLRVKALAKFDEVSKQFEKMRQSYEKEGYKSDAYLKAQDII
QTELMGIRFTAKMVEKLADTLRAQVEEVRQLERAVLHTCVDRAGMPRSHFLKAFPGNETN
LQWVLDEVAAAHAYSETLERQVPAVQELQQKLIDLQTRVVLPLKDLKDVNKRMATGEAKA
RKAKREMTEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYAT
WWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQILQETGAEPDPATLAQKMDMPED
KIRKILKIAKEPISMETPIGDDDDSHLGDFIEDTATLAPSDAALHGSMRDVVKEVLDSLT
PREAKVLRMRFGIEMSTDQTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRADKLKSFLE
GQ
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggtcgccaagcccgctgccaagacggccgccaagaaggcggccaccaagacggtc
gcggccaagacggccgccgccgacaagccggccaagaccaccaaggcgcgcgccaagaag
gccgaggacaagctggccgacctggtcggcgccgcgcgtccggcgcccagcggccgccgc
cccggccgtcccgcgaagaacgccaacaacgatagcgacgctttcgacgattccatggac
ggcgaaggcgaagtgctgcccgacctgaagccgcccaagcgcggcggcaagcgcggcaag
gccgatcccaaggatctgatcgcccgcggccccgtcacgcccgaggaatacgaagcgcgc
cgcaatcgcctcaagcagctgatcaagctgggcaaggaccgcggctacctgacctacggc
gaaatcaacgaccatctgcccgacgacctggtcgacgccgaagcgatcgacggcatcatc
agcaccttcagcgacatggggatcgcggtctatgaccaggcccccgacgccgaaaccctg
ctgatgagcgagaacgcgccggtcgcctccaacgacgacgatgtcgaggacgaggccgag
gccgccctcaccaccgtggactccgactttggccgcaccaccgaccccgtgcgcatgtac
atgcgtgaaatgggctcggtcgagctgctgacgcgcgaaggcgaaatcgaaatcgccaag
cggatcgaggacggcctcaagcacatggtgatggccatctcggcttgtcccaccaccatc
aacgaaatcctcgcccacatcttgcgcgtgcgcgaaggccaggcccagatcgacgaagtg
gtcgatggcctggtcgatcccgaggacggcgaggaatacgccggcgccggcgtgaccgcc
gacgaggacgaaggcgatgacggcccggccggcggcatgtccagcaagcagctggaagac
ctgcgcgtcaaggccctggccaagttcgacgaggtgagcaagcagttcgagaagatgcgc
cagtcctacgagaaggaaggctataagtcggacgcctatctcaaggcccaggacatcatc
cagaccgagctcatgggcatccgcttcacggccaagatggtcgagaaactggccgatacc
ctgcgcgcccaggtcgaggaagttcgccagctcgagcgcgcggtgctgcatacctgcgtc
gaccgcgccggcatgccgcgctcgcacttcctcaaggccttccccggcaacgagaccaac
ctgcagtgggtgctggacgaagtcgccgccgcccatgcctacagcgaaaccctcgaacgc
caggtcccggccgtgcaggaactgcagcagaagctgatcgacctgcagacgcgcgtcgtg
ctgccgctgaaggacctcaaggacgtcaacaagcgcatggccaccggcgaagccaaggcc
cgcaaggccaagcgcgaaatgaccgaggccaacctgcgcctggtgatctccatcgccaag
aagtacaccaaccgcggcctgcagttcctggacctgatccaggaaggcaacatcggcctg
atgaaggcggtggacaagttcgaataccggcgcggctacaagttctcgacctacgccacg
tggtggatccgccaggccattacgcgctccatcgccgaccaggcgcgcaccatccggatc
ccggttcacatgatcgaaacgatcaacaagatgaaccggatcagccgccagatcctgcag
gaaaccggcgccgagccggatcccgcgaccctggcgcagaagatggacatgcccgaggac
aagatccgcaagatcctgaagatcgccaaggagccgatctccatggaaacgcccatcggt
gacgacgacgactcgcacctgggcgatttcatcgaggacaccgccaccctggcgccttcc
gacgcggcgctgcacggctcgatgcgcgatgtggtcaaagaagtgttagactccctcacc
ccgcgcgaggccaaggtgctgcgcatgcgtttcggcatcgaaatgagcaccgaccagacg
ctggaagaggtgggcaagcagttcgacgttacgcgcgagcgcatccgtcaaatagaggcc
aaagcgctgcgcaagctgcgccaccccagccgcgccgacaagctgaagagcttcctcgaa
gggcagtaa
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integrated database retrieval system
