Bordetella bronchiseptica RB50: BB3561
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Entry
BB3561 CDS
T00141
Symbol
gabD
Name
(GenBank) putative succinate-semialdehyde dehydrogenase [NADP+]
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
bbr
Bordetella bronchiseptica RB50
Pathway
bbr00250
Alanine, aspartate and glutamate metabolism
bbr00310
Lysine degradation
bbr00350
Tyrosine metabolism
bbr00650
Butanoate metabolism
bbr00760
Nicotinate and nicotinamide metabolism
bbr01100
Metabolic pathways
bbr01120
Microbial metabolism in diverse environments
Module
bbr_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
bbr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
BB3561 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
BB3561 (gabD)
00310 Lysine degradation
BB3561 (gabD)
00350 Tyrosine metabolism
BB3561 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
BB3561 (gabD)
Enzymes [BR:
bbr01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
BB3561 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
BB3561 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
BB3561 (gabD)
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GFIT
Motif
Pfam:
Aldedh
LuxC
DUF2292
Motif
Other DBs
NCBI-ProteinID:
CAE34055
UniProt:
A0A0H3LVT0
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All DBs
Position
complement(3781176..3782630)
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AA seq
484 aa
AA seq
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MNVTDGIAQRLMAEYTGILIDGVWQAGEGSFPVLDKYTLAPAAEVSRASRRQVAQAVSQC
KAAADRGAPAARERAAILRRAAGLLDAYRQDFEAVMMVEGGFTVHDISAEFTRAKVTLEL
SADEALRLTGSMVPFQASPGAEHKLGFTVRVPVGVVAAITPFNAPLNTVLHKVAPAFAAG
NSVVLKPSAFTPLTSALLARVLLEAGMPPEFLAVVQGEGDDVGTWLLEEQDVAFYTFTGS
TRVGRIIQRAAGLRRTQMELGSIASTIVCADADLEAAVPRIANAAFRKAGQVCTSIQRLY
VEDALKNELIERLSRYLDDMPAGDPRAGATRVGPMISEAAAARAQAWIAEAVEAGARLVR
GGERQGAVVQPAVLADVPESCSAWSTEVFSPMVSIRGFARFDDVLASANDTPYGLAAGIF
TNDHARIMSAVRALRFGTVHINETSSARCDVMPFGGVKDSGFGKEGPGYAAREMTEERLI
VFNQ
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgacggacgggattgcgcaacggttgatggctgagtacacaggcatcctgatc
gacggcgtctggcaggcgggagagggcagctttccggtgctggacaaatacaccctggcg
cccgccgccgaggtctcccgcgccagccgccggcaggtcgcgcaggcggtgtcgcagtgc
aaggcagcggccgaccggggagcgccggcggcgcgcgaacgcgcggccatcctgcgccgc
gcggccggcctgctggacgcctatcgtcaggacttcgaggccgtcatgatggtggagggc
ggctttaccgttcacgacatttccgccgagttcacgcgggccaaggtgacgctggaactg
tcggccgacgaagcgctgcgtctgaccggcagcatggtgccgttccaggccagcccgggc
gcggagcacaagctggggttcacggtgcgtgtcccggtgggcgtggtggcggcgatcacg
ccgttcaacgcgcccttgaacacggtgctgcacaaggttgcgccggccttcgcggcgggc
aattccgtggtgctcaagccgtcggccttcacgccgctgaccagcgcgctgctggcgcgg
gtgctgctcgaggccggcatgccgcccgagttcctggccgtggtccagggcgagggcgat
gacgtcggtacgtggctgctggaagagcaggatgtggcgttctatacattcacgggcagt
acccgggtcgggcgcatcatccagcgtgccgccgggttgcggcgcacgcagatggagctg
ggcagcatcgccagcaccattgtctgcgcggatgccgatctcgaggccgccgtgccgcgg
atcgccaacgcggcgttccgcaaggctggccaggtgtgtacatcgattcaacggctgtac
gtcgaggacgcgctcaagaacgagctgatcgaacgcttgtcccgctacctggacgacatg
cccgccggcgatccgcgcgccggcgcgacgcgggtgggccccatgatcagcgaggcggcc
gcggcgcgggcgcaagcctggatcgccgaggccgtcgaggcgggcgcgcgcctggtgcgc
ggcggcgagcgccagggggcggtggtacagccggccgtcctggccgacgtgcccgagtcc
tgctcggcctggagcaccgaggtgttctcgcccatggtgtcgatcaggggctttgcccgc
ttcgatgacgtcctggccagcgcgaacgacacgccctatggcctggccgccggcatcttc
accaatgatcacgcccgtatcatgagcgccgttcgtgcgctgcgcttcggtacggtgcac
atcaacgagacctccagcgcgcggtgcgacgtcatgccgttcggcggcgtcaaggacagc
ggtttcggcaaggaggggcccggttatgcggcccgcgagatgaccgaagagcgcctgatc
gtcttcaaccagtag
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