Bifidobacterium breve NCFB 2258: B2258_0005
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Entry
B2258_0005 CDS
T03122
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
bbrn
Bifidobacterium breve NCFB 2258
Brite
KEGG Orthology (KO) [BR:
bbrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbrn03032
]
B2258_0005
03400 DNA repair and recombination proteins [BR:
bbrn03400
]
B2258_0005
Enzymes [BR:
bbrn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
B2258_0005
DNA replication proteins [BR:
bbrn03032
]
Prokaryotic type
DNA Topoisomerases
B2258_0005
DNA repair and recombination proteins [BR:
bbrn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B2258_0005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AHJ20267
LinkDB
All DBs
Position
4951..7089
Genome browser
AA seq
712 aa
AA seq
DB search
MTFITEVDPVVTEGSLLAEETSKEEQLKAAAERINNAELTEGELDESMAPEHYEASDLRV
LEGLEAVRIRPGMYIGSTGPRGLHHLVYEIVDNSVDEALAGYASHIEVTILPDNGIRVVD
DGRGIPVDEVPGEGVSGVETVMTKLHAGGKFGGGGYAVSGGLHGVGISVVNALSTHVDIE
VRRQGFHWTQTYVDQHPVAPLKQGEPMAEDESTGTSVTFWADPKIFETTIYDFETLRSRF
QQMAFLNKGLKLSLTDERVTDQAGDEVAGDAEGEPGEKHQTVTYQYLNGIKDYVDYLVKV
RKATPVEEDVISFEAEDLKLGISAELAMQWTTAYSEAVHTFANTISTTEGGTHEEGFRAA
LTSLVNRYARDKAILKDKDENLSGDDVREGLTAVISVKLTNPQFEGQTKTKLGNSEAKTF
VQRVMTDKLGDWFDAHPAEAKNIIQKAIEASRARLAAKKARENTRRKSIFESAGMPDKLK
DCQSSNPEECELFIVEGDSAGGSAIQGRNPITQAILPLRGKILNTERASLDRMMKSDTIE
SLITAVGGGYGEDFDISKVRYHKVIIMADADVDGAHIATLNLTLFFRYMRPMITAGYVYV
AMPPLYRLKWTKGPHDFVYTDAERDRVLAEGKANGRQLPKGEGIQRYKGLGEMSYQELWE
TTMDPEHRILKQVHIEDAAAADETFSMLMGDEVEPRRLFIQRNAKNVRWIDA
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcattacagaggttgaccccgtagtcacggaaggaagcctgttggcagaagaa
accagcaaagaggagcagctgaaggcggctgcggaacgcatcaacaatgcggaattgacc
gaaggcgagcttgacgaatccatggctcccgagcattatgaggcctctgaccttcgagtg
cttgaaggtcttgaagccgtgcgtatccgtccaggtatgtacatcggctccaccggtccg
cgtggtttgcaccacttggtctacgaaatcgtcgataactcggtcgatgaggcgctggct
ggatatgccagccatattgaagtcactatcctgccggacaacggtatccgcgtggtggac
gatggccgaggcattccggttgatgaggttcctggcgaaggcgtctccggtgttgaaacc
gtgatgaccaagctgcacgccggcggcaagtttggtggcggcggctacgcggtgtccggc
ggtctgcacggcgtgggcatctccgtggtgaacgccctgtccactcacgtggacatcgaa
gtgcgccgtcagggcttccactggacccagacttatgtcgaccaacatccggttgcgccg
ctgaaacagggcgagccgatggccgaggacgaatccaccggtacatccgtgaccttctgg
gccgacccgaagatctttgaaaccaccatctatgatttcgaaacgttgcgttcccgcttc
caacagatggccttcctgaacaagggcctgaagcttagcctgaccgacgaacgcgtcact
gaccaggccggcgacgaagtggccggcgacgccgaaggcgagcccggtgagaagcaccaa
accgtcacctaccagtacctcaacggcatcaaggattacgtcgactacctggtcaaggtg
cgcaaggccacaccggtggaagaggatgtcatcagcttcgaggccgaagacctcaagctc
ggcatttccgctgaactcgccatgcagtggactaccgcctactccgaggctgtgcacacc
tttgcgaacacgatttccaccactgaaggcggcacccacgaggagggcttccgtgcggca
ctgacctcgctggtcaaccgttacgcgcgtgacaaggccatcctcaaagacaaggacgag
aacctgtccggcgacgacgtgcgtgaaggcctgacggccgtgatctccgtcaaactcacc
aacccgcagttcgaaggccagaccaagaccaagctcggtaactccgaagccaagaccttt
gtgcagcgcgtgatgaccgacaagctcggcgactggttcgacgcccaccctgccgaggcc
aagaacatcattcagaaggccatcgaagcctcccgtgcccgtctggccgccaagaaggcc
cgcgaaaacacccgccgcaagtccatcttcgagtccgccggcatgcccgacaagctcaag
gactgccagtcctccaatccggaagagtgcgagctgttcattgtggagggtgattccgca
ggcggttccgccattcagggccgcaacccgatcacacaggccatccttccgctgcgaggc
aagatcctcaacaccgaacgtgccagcctggaccgtatgatgaagtccgacaccatcgaa
tcgctgatcaccgcggtcggtggtggctacggcgaagacttcgacatttccaaggtgcgc
tatcacaaggtcatcatcatggccgatgccgatgtggacggtgcgcatatcgccaccctg
aacctgacgctgttcttccgctacatgcgtccgatgatcaccgccggttacgtgtacgtg
gccatgccgccgctgtaccgcttgaagtggaccaagggtccgcacgacttcgtgtacacc
gacgccgagcgtgaccgtgtgcttgccgaaggcaaggccaacggccgccagctgcccaag
ggcgaaggcattcagcgctacaagggtctgggcgagatgagctatcaggagctgtgggaa
accaccatggatcccgaacaccgcattctgaagcaggtacacatcgaggatgcggccgca
gccgacgagaccttctcgatgctgatgggcgacgaagtggaaccgcgccgcctcttcatc
cagcgcaacgccaagaacgtgcgttggatcgacgcgtaa
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