Bifidobacterium breve NCFB 2258: B2258_0979
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Entry
B2258_0979 CDS
T03122
Name
(GenBank) Holliday junction DNA helicase ruvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
bbrn
Bifidobacterium breve NCFB 2258
Pathway
bbrn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbrn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B2258_0979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbrn03400
]
B2258_0979
Enzymes [BR:
bbrn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B2258_0979
DNA repair and recombination proteins [BR:
bbrn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B2258_0979
RecFOR pathway proteins
B2258_0979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
TIP49
AAA_14
AAA_22
Mg_chelatase
nSTAND3
AAA_3
RNA_helicase
NTPase_1
Sigma54_activ_2
Zeta_toxin
TsaE
AAA_18
AAA_25
NB-ARC
IstB_IS21
AAA_33
AAA_19
AAA_17
POTRA_2
Rad17
NACHT
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AHJ21180
LinkDB
All DBs
Position
1183623..1184687
Genome browser
AA seq
354 aa
AA seq
DB search
MSKDMNYGTSNTGANEESLRMVSSQPIGNEPVSDEELRPHVLEGFIGQPRLKAQLQLFLD
AARKRDVPPDHILLAGPPGLGKTTLAMIVANELEVPIRVTSGPAVQHAGDLASILSSLDT
GEVLFIDEIHRLPRAAEELLYIAMEDFRVDVMVGKGPGASSIPLTLPRFTVIGATTREGM
LPSPLRARFGFTAHLDFYPYEELEKLIERSANVLGVNLDEGSAHELALRSRGTPRIANRL
LRRVRDWAIVHDLIVVHPADVKEALALYQIDSEGLDRLDIAVLNAIVRNFNGGPVGLNNL
AAMVGEESETVETVCEPYLVREGFMVRTPKGRVATEKAWQHLGITPKDDVSKLF
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggacatgaactacggcacatccaacactggagcaaatgaagaatcattgcgc
atggtgtcttcgcaaccgataggcaacgagccggtcagtgatgaagagctccgcccgcat
gtgcttgaggggttcatcgggcagccccggctcaaggcccagctccagctgtttctcgac
gcagcccgcaaacgtgacgtgccgccggatcacatactgcttgccggccctccaggcctc
ggtaagaccacattggccatgattgtggccaatgaacttgaagtcccgattcgcgtgacc
tccggccctgctgtgcagcacgccggcgacctggcttcgatcttgagttcgctggatacc
ggcgaagtgctgtttatcgatgagatccaccgtctgccgcgcgcagccgaagagctgctg
tatatcgcgatggaggattttcgcgtggatgtgatggtgggcaaaggaccgggcgccagc
tcgattccactgactctgcctcgcttcaccgtcattggcgccaccacccgcgaaggtatg
ttgcccagcccgttgcgtgcgcgcttcggcttcaccgcacatcttgacttctatccgtat
gaggagttggagaagcttatcgaacgctcggcaaacgtgctgggggtcaaccttgatgag
ggttccgcccatgaactcgcattgcgttcccgcggcacgccgcgtatcgccaaccgtctg
ctgcgccgcgtgagggattgggccattgtgcatgaccttatcgtcgtgcacccagctgat
gtcaaagaggccttggcgctgtaccagattgattccgaaggccttgaccggctggatatc
gccgtgctgaacgccattgttcgcaatttcaacggtggtcccgtcggcttgaacaacctc
gcggccatggtgggcgaggaatcggaaaccgtggaaaccgtctgtgagccgtatctggtg
cgcgagggattcatggtgcgcacgcctaaaggccgcgtggccaccgagaaggcatggcag
catctgggcattacgcccaaggatgatgtcagcaagctcttctag
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