Bifidobacterium breve ACS-071-V-Sch8b: HMPREF9228_0873
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Entry
HMPREF9228_0873 CDS
T01844
Symbol
uvrC
Name
(GenBank) excinuclease ABC, C subunit
KO
K03703
excinuclease ABC subunit C
Organism
bbv
Bifidobacterium breve ACS-071-V-Sch8b
Pathway
bbv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bbv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HMPREF9228_0873 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbv03400
]
HMPREF9228_0873 (uvrC)
DNA repair and recombination proteins [BR:
bbv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HMPREF9228_0873 (uvrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UVR
HHH_5
GIY-YIG
HHH_2
HHH
DUF1995
UPF0758_N
DUF4124
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
AEF26978
LinkDB
All DBs
Position
complement(1009205..1011622)
Genome browser
AA seq
805 aa
AA seq
DB search
MTNDIERHSPDEWRKTAAALMPESSSAGAEESAATAKVNANGAPLLGDSRDLFRPKTSDI
PAKPGVYKWRDGQGRVIYVGKAKNLRNRLTNYFQPLYLLHPRTQTMVLTARSLEWTVVAT
ELESLTLEYTWIKEFDPRFNVQFRDDKTYPYLAVSTGEQVPRVWVTRSRKRRDTRYFGPY
AKVWELRHSLDRLLRTFPVRTCTTNVFHKAQLTGRPCLLASIGKCSAPCVNQIEADEHRR
LCEQLVGVMTGRLGRPYIAQLTRDMKEASAELEFEKAARLRDQIQMLETVVQQNAVVFDQ
DVDADVFGFASDELEASVHAFYVRAGSIRGERNWSVERVEDIADTDLMADLLVQVYSDEA
GNDHPQSAAPTAPASGGENAAVLPLAGAGTRSVTGGGAATISTSREAIGSTQTLTAMDAI
ARAQATRERNTRQETTGRVDLLAPIAPVPREIIVPIEPSRRAELESWLTDQRGGAVTIRV
ASRGDKKQLMDRANENANQALQRSKMSRISDMGARTQAMNDVAKALGLNQAPLRIECYDI
SNTVGGAFQVASMVVFEDAIAKKSEYRRFSIRGKDGQGAVDDLSALYETLTRRFKHGNIA
GDSGESIDAEQRAAKAEQQQEQSASDVNGTSSTTPAAITDASSFADSSEVVQQNTNRHHF
AYKPNLVVVDGGKPQVMAAAKALKDCGVDDVAVCGLAKRLEEVWVPDDDYPIILKRQSEG
MYLLQRVRDESHRFAITYHRQQRRKGALRSALDEIPGIGESYQKRLLNHFGSVKAMRMAS
VEDFEQVKGVGHAKAEALYAALHDE
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacgatatcgagcggcatagtccggacgagtggcgcaagactgcggcggcgttg
atgccggaaagctctagtgcaggagccgaagaaagcgcagctacggcgaaggtgaatgcg
aatggggcgcctttgctgggggattctcgtgatctgtttcggcctaagacttcggacatt
ccggccaagcctggtgtgtataagtggcgcgatgggcaagggcgcgtcatttatgtaggc
aaggccaagaacctgcgcaataggcttaccaattatttccagccactgtatctgctgcat
ccgcgcacacagaccatggtgcttacggcacgcagtctggagtggacggttgttgccact
gagttggaatcgttgacgcttgagtacacgtggatcaaggagttcgatccgcggttcaac
gtgcagttccgcgacgacaagacctatccgtatctggcggtcagcacgggggagcaggtt
ccccgcgtgtgggtcacgcggtcgcgcaaacgccgcgatactcgttacttcggcccatac
gccaaggtgtgggagctgaggcacagcctcgatcggctgctgcgcacctttccggtacgt
acctgcaccacgaatgtatttcataaagctcagctgaccggccggccctgcctactggcc
tctatcggcaaatgctcggctccctgcgtgaatcagattgaagcggacgaacatcgacgg
ctgtgcgaacaacttgttggcgtcatgaccggacgccttggacggccgtatatcgcgcag
ttgacccgcgacatgaaagaggccagcgccgagcttgaattcgagaaggcggcccgtctg
cgcgatcagattcagatgctggagaccgtggtgcagcagaacgccgtcgtcttcgatcag
gacgtggacgccgacgtgtttggctttgccagcgacgaattggaagcctccgtgcacgcc
ttctatgtgcgtgccggctcgattcgcggcgaacgcaactggagcgtcgaacgggtcgag
gacatcgctgatactgacttgatggcggatcttctggtgcaggtgtattcggatgaggca
gggaatgaccacccccagtcggctgcgccgacagcccctgctagcgggggcgaaaatgca
gccgtgctcccgctggcgggggctggcacgcgaagcgtgactgggggtggcgctgcaacc
atttccaccagtcgcgaagccatcggctccacgcagacccttacggccatggacgcgatt
gctcgcgcccaggccacccgcgaacgcaatacccgtcaggaaaccaccggccgcgtggat
ctgctggctcccattgcgcctgtgccgcgcgaaatcatcgtgccgatcgaaccctcccgg
cgtgcggaactcgaaagctggctgaccgaccagcgcgggggagcggtgaccattcgcgtg
gcctcccgaggcgacaagaagcagctcatggatcgcgccaacgagaacgccaaccaggcg
ttgcagcgcagcaagatgagccgcatctccgatatgggcgcacgcacccaggccatgaac
gacgtggccaaggccctgggcctgaaccaggcgccgttacgcatcgaatgctacgacatt
tcgaacaccgtgggtggcgccttccaggtggcttccatggtggtgttcgaggacgccatc
gccaagaaatccgaataccgtcgtttttccattcgcggcaaggacgggcaaggagcagtg
gacgatctctccgcgctctacgagacgctgacgcgacgtttcaagcatggtaatatcgcc
ggggattccggcgagagcatcgacgcggagcagcgcgcggccaaggctgagcaacagcag
gaacaatccgcatccgatgtaaatggcaccagcagtacgacgccggcagcaattaccgat
gcctcatcatttgccgattcgtctgaagtggtccagcagaacacgaatcgtcatcacttt
gcatacaagccgaatctcgtggtggtcgatggcggcaaaccgcaggtcatggccgcggcc
aaggctctcaaggattgcggcgtggatgatgtggccgtctgtggcttggccaaacgcctc
gaagaggtatgggtgccggatgatgactatccgatcatcctcaaacgccagtccgaaggc
atgtacctgctgcagcgcgtacgtgacgaatcgcatcgattcgcaatcacctaccatcgc
cagcagcgccgcaaaggcgcgctgcgcagtgcgctcgatgagattccgggtattggagag
agctatcagaaacggctgctcaatcatttcggttcggtcaaagccatgcgtatggccagc
gtcgaggacttcgagcaggtcaaaggtgttggccacgccaaggccgaggcgttgtatgcc
gcgttgcatgacgagtag
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