Burkholderia cenocepacia DDS 22E-1: DM39_566
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Entry
DM39_566 CDS
T03308
Symbol
pcnB
Name
(GenBank) poly(A) polymerase family protein
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
bcen
Burkholderia cenocepacia DDS 22E-1
Pathway
bcen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DM39_566 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcen03019
]
DM39_566 (pcnB)
Enzymes [BR:
bcen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
DM39_566 (pcnB)
Messenger RNA biogenesis [BR:
bcen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
DM39_566 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AIO32600
UniProt:
A0A088U4Y8
LinkDB
All DBs
Position
1:complement(610142..611677)
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AA seq
511 aa
AA seq
DB search
MIKKFIRKLLGQDDAAQTSPAAAPAVEAAPAPRPAKGNRGGGAKKPRSNHEPTVVPASVH
GIDPSLISRNAVRVTDTLQQAGFRAFIVGGAVRDLLLGIAPKDFDVATDATPTEVQRLFR
RARLIGRRFQIVHVQFGQELIEVSTFRALVDAPPEAAAAEPPKRLKRDELDRRTHAVDAS
GRVLRDNVWGEQHEDAARRDFTINAMYYDPSTQTVLDYHDGMADVRARLLRMIGDPATRY
REDPVRMLRVVRFAAKLGFEIEPHTREPIHALADLINNVPAARLFDEMLKLLLSGHALAC
LQRLRKEGLHHGLLPLLDVVLEQPQGEKFITLALNNTDARVRAGKPVSPGFLFATLLWHD
MRQRFEQYTAEGEFPVPALHRAMDDVLDMQTEKLAIHKRYSADMREIWGLQLRLEKRSGR
SALRLLEHQRFRAGYDFLLLRCESGELEQDVGQWWTDFIEGDAAAREALLTQGGSKEKSP
RKRRRRGGARNRKPAEGGAEHAPEASNGSDD
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaagaaattcatccgcaagctgctcggccaggacgacgccgcgcaaacgtctccc
gcagcggctccggccgtcgaagcggcccccgccccgcgccccgccaagggcaaccgcggc
ggcggcgcaaagaagccgcgcagcaaccacgagccgaccgtcgtgccggccagcgtgcac
ggcatcgacccgtccctgatctcgcgcaacgcggtgcgcgtgaccgacacgctgcagcag
gcgggcttccgcgcgttcatcgtcggcggcgcggtgcgcgacctgctgctcggcatcgcg
ccgaaggacttcgacgtcgcgaccgacgcgacgcccaccgaggtgcagcgcctgttccgc
cgcgcgcgcctgatcggccgccgcttccagatcgtccacgtgcagttcggccaggagctg
atcgaggtgtcgacgttccgcgcgctggtcgacgcgccgccggaagcggccgccgccgag
ccgccgaagcgcctgaagcgcgacgaactggaccgccgcacgcacgcggtcgacgccagc
ggccgcgtgctgcgcgacaacgtctggggcgaacagcacgaagacgccgcgcgccgcgac
ttcacgatcaacgcgatgtactacgacccgtcgacgcagacggtgctcgactatcacgac
ggcatggccgacgtacgcgcgcgcctgctgcggatgatcggcgatccggccacgcgctat
cgcgaggatccggtgcggatgctgcgcgtcgtgcgtttcgcggcgaagctcggcttcgag
atcgagccgcacacgcgcgagccgatccacgcgctcgccgacctgatcaacaacgtgccg
gccgcgcgcctgttcgacgagatgctgaagctgctgctgtcgggccacgcgctcgcgtgc
ctgcagcggctgcgcaaggaagggctgcatcacgggctgctgccgctgctcgacgtcgtg
ctcgaacagccgcagggcgagaagttcatcacgctcgcgctgaacaacaccgacgcgcgc
gtgcgcgcgggcaagccggtgtcgccgggcttcctgttcgcgacgctgctgtggcacgac
atgcgccagcgcttcgagcagtacacggccgaaggcgaattcccggtgcccgcgctgcat
cgcgcgatggacgacgtgctcgacatgcagaccgagaagctcgcgatccacaagcgctat
tcggccgacatgcgcgagatctggggcctgcagctgcgcctcgaaaaacgctcgggccgc
agcgcgctgaggctgctggaacaccaaagatttagagcggggtatgatttcctcctgtta
cgctgcgaatccggcgaactggaacaggacgtcggacagtggtggacggatttcatcgaa
ggcgacgcggccgctcgcgaagcattgctcacgcagggcggctcgaaggaaaaatcgccc
cgcaagcggcgccgccgcggcggtgcgcggaaccgcaaaccggccgaaggcggcgctgag
cacgcgccggaagcctcgaacggttccgacgactga
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