Burkholderia cenocepacia DWS 37E-2: DM40_1877
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Entry
DM40_1877 CDS
T03488
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bcew
Burkholderia cenocepacia DWS 37E-2
Pathway
bcew03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DM40_1877 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcew03400
]
DM40_1877 (recD)
Enzymes [BR:
bcew01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DM40_1877 (recD)
DNA repair and recombination proteins [BR:
bcew03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DM40_1877 (recD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
SH3_13
UvrD-helicase
Helicase_RecD
SLFN-g3_helicase
DEAD
RecD_N
AAA_22
MukB
CbiA
ATPase
Motif
Other DBs
NCBI-ProteinID:
AIO42575
UniProt:
A0AA86FMW2
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All DBs
Position
1:2021620..2023956
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AA seq
778 aa
AA seq
DB search
MNAPDDTLEFAGGLVARLPEPADFGIALAEGFARRIGELSRRAGAPAAAARWAARAAFAA
SRATAAGHVCVSLAALAQRYDESVDNVRAALAASGLVAFGALARGDERPLIVDRHDHLYL
SRYFDYERRLADALVAQAGVAAPADALAPERLRDSLERYFGPATGDVDWQRVAAIVALTG
RVTIVSGGPGTGKTTTVVGVLACLLDAHPGLRIALAAPTGKAAQRMQEALHARAGDLPPE
LAARLPDTSYTLHRLLGGGGAAGFRHHRDNPLPYDLIVVDEASMIDVALAAHLLDALAPG
ARLVLLGDKDQLAAVEAGAVFAELSARPTFTPAARARIAEALGIDEAVFVAALPVPDGDT
AGEVDARMPASASAPASASASASASASNPPTASLPATAARKPAARRHVDARQASLFDDEP
SDEPPGRADIAPPAASPPLAQPTPADTDTGNGVAASDPAWIEADELAWLDAVELAPFDPA
LAPAAAPRADDIAAASPAPAPLADCVVWLERNYRFGLDSPIGRLSLAIRRGDVQAALDAL
PADDTAAASFHDDVGDTLSASTVERLARRFGAYLDALRTALSEPVPDPLPLFDALNRFRI
LCATRAGARGAEHVNALVATHVRHVVRVPLAVGAHWFAGRPVMVTRNDYALGLFNGDIGI
ALPDAHGVLRVWFRRADGTARAVSPAALPPHETAFALTVHKSQGSEFDEAALVLPASFGR
VLTRELVYTAVTRARTRVQVIGPRRVLAQAVATRTQRDSGLAARVDEALARRRRETSR
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgcccgacgatacgctcgaattcgccggcggcctcgtcgcgcgtctgcccgag
cccgcggatttcggcattgcgctcgcggaaggatttgcacgccgtatcggtgaactgtcg
cgccgcgcgggggcgccagccgccgccgcgcgttgggcggcgcgtgccgcgttcgcggcg
agccgcgcgaccgcggccggccatgtgtgcgtatcgcttgccgcacttgcgcaacgctac
gacgaatcggtcgacaacgtgcgcgcggcgcttgcggcgagcgggctggtggcgttcggc
gcgctcgcgcgcggcgacgagcggccgctgatcgtcgaccggcacgatcatctatacctg
tcgcgctatttcgactacgagcggcggctcgccgacgcgctggtcgcgcaggccggcgtc
gccgcgccggccgatgcgctggcgcccgaacggctgcgcgacagcctcgagcgttatttc
gggccggcgacgggcgacgtggactggcaacgcgtcgcggcgatcgttgcgctgacgggg
cgtgtgaccatcgtcagcggcggccccggcaccggcaagacgactaccgtcgtcggcgtg
ctcgcatgtctgctggacgcgcatccgggcctgcgcatcgcgctggcggcgccgaccggc
aaagctgcgcagcgaatgcaggaagcgctgcatgcgcgtgcgggcgacctgccgccggaa
ctggccgcgcggctgcccgacacgtcgtacacactccatcgcctgctcggcggcggcggg
gcggcgggcttccgtcatcatcgcgacaatccgctgccgtacgacttgatcgtcgttgac
gaggcgtcgatgatcgacgtcgcgctcgccgcgcatctcctcgacgcgctcgcgccgggc
gcgcggctcgtgctgctcggcgacaaggatcagctcgccgcggtcgaggccggcgcggtg
ttcgcggaactcagtgcgcggccgacgttcacgcccgcggcgcgtgcgcggatcgcggag
gcgctcgggatcgacgaggcggtattcgttgccgcgttgccagtgcctgacggcgacacg
gcaggcgaggttgacgcccgaatgccggcttcggcctccgccccggcttcggcttcggct
tcggcttcggcttcggcttcaaatccacccaccgcatcgttgcccgcgacggccgcacgc
aagccggcagcgcggcggcatgtggatgcgcgccaggcgtcgctgtttgacgacgagccg
tcggacgaaccgccgggtcgtgccgacatcgcgccgcccgcggcttcaccgccactcgcg
cagccgacgccggccgacaccgacaccgggaacggagttgcagcgtccgatcccgcatgg
atcgaggccgacgaacttgcatggctcgatgcggtcgagcttgcgccgttcgatcctgcg
ctcgccccggccgccgcaccgcgagccgacgacatcgccgccgcgtcgcccgcacccgca
ccgctcgcggactgcgtcgtatggctcgaacgcaactaccgcttcgggctcgactcgccg
atcggccgcctgtcgctcgcgatccgtcgcggcgacgtgcaggccgcgctcgatgcactg
cctgccgacgataccgcagccgcgtcgttccacgacgatgtgggcgatacgctgtcggcg
tcgacggtcgagcggctggcgcggcggttcggcgcatatctcgatgcattgcgtactgcg
ttgtccgagccggtgcccgatccgttgccgttgttcgatgcgctcaaccgcttccggatc
ctgtgcgcgacgcgcgcgggtgcgcgaggcgccgagcacgtcaatgcgctggtggcgacg
cacgtgcggcatgtcgtacgcgtgccgctcgcggtcggcgcccactggttcgccgggcgg
cctgtcatggtcacgcgcaacgactacgcactcggcctgttcaacggcgacatcggcatt
gcgttgccggacgcgcacggcgtgctgcgcgtgtggttccggcgtgccgacggcaccgcg
cgggcggtttcgcccgccgcgctgccgccgcacgaaaccgcattcgcgctgacggtccat
aaatcgcagggctccgaattcgacgaggctgcgctcgtgctgccggcatcgttcggccgc
gtgctcacgcgcgagctcgtctatacggccgtcacgcgcgctcgtacgcgcgtgcaggtg
atcggcccgcgacgcgtgctcgcacaggcggtcgcgacgcgcacacaacgcgattcgggc
ctcgccgcccgtgtggacgaggcgctcgcgcggcgccgcagggagacgtcgcgatga
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