Alkalihalobacillus clausii: ABC0554
Help
Entry
ABC0554 CDS
T00228
Symbol
xynB
Name
(GenBank) xylan 1,4-beta-xylosidase
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
bcl
Alkalihalobacillus clausii
Pathway
bcl00520
Amino sugar and nucleotide sugar metabolism
bcl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bcl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
ABC0554 (xynB)
Enzymes [BR:
bcl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
ABC0554 (xynB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_43
GH43_C2
DUF1349
Motif
Other DBs
NCBI-ProteinID:
BAD63094
UniProt:
Q5WKL1
LinkDB
All DBs
Position
605391..607058
Genome browser
AA seq
555 aa
AA seq
DB search
MIRNPVLKGFNPDPSICRVGDDYYMAVSTFEWFPGVQIHHSRDLVNWRLISRPLNRISQL
NMIGNPDSGGVWAPCLSYSNGKFWLVYSDVKVVEGNTWKDGHNYLVTCETIDGEWSEPIY
LNSSGFDPSLFHDEDGRKYVVNMVWDQRVYNHRFYGICIQEYSVLEKRLVGKPQMIFKGT
ELGLTEAPHLYQANGYYYLLTAEGGTKYEHAATIARSKDIYGPYEVHPQNPILSSWADPS
HPLQKAGHASLVETQHGDWYMAHLLGRPIKRQGKKLLEERGFCPLGRETAIQKIEWKDDW
PYVVNGPLPSVEVAGPKLPEVQWPQDYPECDPFDHPVLNHHYQTLRIPFNEEIGMIDHEA
GILRLFGRESLHSKHTQALVARRWQSFHFDAATEVSFYPETFQQAAGLICYYDTENWVSL
QVTWHEQKGRILDLVQCDHFHVSQPLQGSEIVVPEQAATVHLKVSVRYDTFSFAYSFDGS
HFEDIGVSFDTYKLSDDYIAHGGFFTGAFVGMHCQDTSGVRKHADFHSFSYHELESNSLN
QAEGGTSARKSVIHG
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgatacgaaaccctgttttaaaaggctttaatccagacccgagtatttgccgggtgggc
gatgattactatatggccgtttccacgtttgaatggtttcccggtgtacaaatccaccat
tcccgtgatttagtcaactggcgcctcattagtcggccacttaatcgcatcagtcaatta
aacatgattggcaaccccgattctggtggtgtgtgggcgccgtgcttgagctactccaat
gggaaattttggcttgtttactctgatgtaaaagtagtggaaggcaatacgtggaaagac
ggccataactatcttgtgacatgtgaaacgattgatggggaatggagcgagcctatttat
ttgaacagctctggctttgatccttctttattccatgatgaagacgggcgtaagtatgtg
gtgaatatggtgtgggaccaacgggtgtacaatcatcgtttttatggaatttgcatacag
gaatacagcgtattggaaaaacgattagttggtaaaccgcaaatgatttttaaagggacg
gaattagggttaacagaagcccctcacctttaccaggcaaacggctattattatttactg
acagcagaaggtggaacgaaatatgagcatgcggccacaattgcccgctcgaaagatatt
tatggcccttacgaagtccatccacaaaaccccatattgtcgagctgggcagatccaagc
catccgttgcaaaaagctggccatgcctctcttgtagaaacgcaacatggcgactggtat
atggctcacttattaggccggcccattaagaggcaagggaagaagctcttagaggagcga
ggcttttgcccacttggccgtgaaacggcgatccaaaaaatagagtggaaagatgactgg
ccttatgttgtcaatggccctttgccatcagtagaagtcgctggaccaaaattgccagaa
gttcaatggccacaagactatcccgagtgtgatccatttgatcacccggtgttaaaccac
cactatcaaacattgcgaattccatttaatgaggaaattggtatgatcgaccatgaagcg
ggcattctgcgcctgtttgggcgggaatcactccactccaaacatacacaagcacttgtc
gcccgccgctggcaaagttttcactttgacgctgcgacggaagtatctttttacccagaa
acgtttcaacaggcagccgggttaatttgctattacgatactgaaaattgggtttcgctt
caagtaacttggcatgagcagaaaggacggattttagatcttgtccaatgcgaccatttt
catgtctcccagccattgcaaggcagtgaaatcgttgtgccagaacaggcagccactgtc
caccttaaagtcagcgtccgttacgatacattctcgtttgcttattcttttgatggcagc
cattttgaggatattggcgtttcttttgacacctataaactttctgacgactacatcgcc
catggtgggttttttacaggagcgtttgtcggcatgcattgccaagacacgtcaggtgta
cgtaaacatgcagatttccactcgttttcttatcacgagttagagagcaacagtctcaat
caagcagaaggaggtacaagcgctaggaaaagtgtgattcatgggtga
DBGET
integrated database retrieval system