KEGG   Alkalihalobacillus clausii: ABC2213
Entry
ABC2213           CDS       T00228                                 
Name
(GenBank) beta-lactamase superfamily Zn-dependent hydrolase
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
bcl  Alkalihalobacillus clausii
Pathway
bcl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bcl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ABC2213
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bcl03019]
    ABC2213
Messenger RNA biogenesis [BR:bcl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     ABC2213
SSDB
Motif
Pfam: RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Lactamase_B_6
Other DBs
NCBI-ProteinID: BAD64748
UniProt: Q5WFV7
LinkDB
Position
complement(2339245..2340912)
AA seq 555 aa
MSKQETEKVRVFALGGVGEIGKNMYGIEVDEDIIVIDAGLMFPDDDMLGVDIVIPDVSYL
VENEERVRGIILTHGHEDHIGGLSYVLKKINVPVYATKLTLGLVEEKLKEAGIHRHAELR
LIDSNSRIKLGNTPVSFFRVSHSIPDCVGVCVETSQGAIVHTGDFKFDQTPVDGKHADIG
KMAAIGQKGVLCLMSDSTNAERPGTTKSEAEAGKGIKDVFARTKGRLIVTSFASNVHRIQ
QVIQAASATNRKLAVVGKSMVRVISIAGKLGYLKIPKDLLIDMDEVNKHKPEKVAILTTG
SQGEPMSALTRMAKGAHRHITITPNDTVIIAATAIPGNETSVSAVIDQLYRIGAEVIYGS
QAVHASGHGSQEELKLMLNLMRPKFFLPIHGEIRMQHAHQQLALQVGIKKERIYIVEKGE
VIEFTKQQARRGPKVPSGHVLIDGLGVGDVGNIVLRDRRLLSKDGILVVVVTLNKKTNTI
VSGPNIISRGFVYVRESEELLEKSNELVTSILQKCVTENVNEWSSLKSNIREGLSRYLFE
KTKRRPMILPIIMEV
NT seq 1668 nt   +upstreamnt  +downstreamnt
ttgtctaagcaagaaacagaaaaagtgcgtgtgtttgccctcggcggagtcggcgaaatc
ggcaaaaatatgtacggcattgaagtagatgaggatatcattgtcattgacgcgggttta
atgttccctgatgacgatatgcttggagtcgacatcgttattccagatgtgtcttattta
gtggaaaacgaagaacgtgtacggggaattattttgacacatggacacgaagaccatata
ggcgggttgtcatatgtgctgaagaaaatcaacgtgcctgtgtatgccacaaagctaacg
ttagggctcgttgaagagaaattgaaagaagcaggcattcataggcacgcagaactgcgc
ttaatcgattccaactcgcgcattaagttaggaaatacaccagtatctttctttcgtgtt
agccatagcattccagattgtgttggtgtctgcgtggaaacgtcccaaggcgccattgtc
catacaggtgattttaagtttgaccaaacaccggtcgatggaaaacatgctgatatcgga
aaaatggcagcaattggccaaaaaggtgtgctctgcctcatgtctgattctacgaatgca
gagcggccagggacaacgaaatcggaagcagaggccggcaaaggcataaaagacgtgttc
gctcgtacaaaaggacgccttattgtcacctcgtttgcttcaaacgtccatcgaatccag
caagtgatccaagcggcttccgctaccaatcgaaagcttgcagttgttggcaaaagcatg
gtgcgcgttatttccatcgctggaaagcttggctacttgaaaataccgaaagatttatta
attgatatggatgaagtgaacaagcataaaccagaaaaagtggcgattttgacaacagga
agccaaggggagccgatgtcagcgttaacgcggatggcaaaaggagcacatcgccatatt
acgattacaccaaatgacacagtgattatcgctgctacagcgattcctggaaatgagaca
agcgtatccgccgtcatcgaccagctttaccggattggcgctgaggtgatttatggcagc
caggctgtccatgcctctggccatggttcacaagaagagctaaagttgatgcttaatttg
atgcgtccaaagtttttcttgccgatacacggggaaatccgcatgcagcatgctcaccag
caattggctttgcaagttggcataaaaaaagaacggatttatatagtcgaaaaaggggaa
gtcattgaattcacaaaacaacaagcacggcgcgggccaaaagtgccatcaggccatgtg
ttaattgacggacttggtgtcggcgatgtcggcaacattgtcttgcgcgatcgccgcttg
ctttctaaagatggcattctagtcgtggttgtcacattgaacaaaaagacaaacacaatt
gtatctggaccgaatattatttcccgcggattcgtctatgtccgtgaatcagaagagctt
ctcgaaaaatcaaatgagcttgtgacctccattttgcaaaaatgcgtgacagaaaatgtt
aatgaatggtcaagcttaaaaagcaacattcgtgaaggcttaagccgctacttatttgaa
aaaacaaaaaggcggccaatgatcttgccgatcattatggaagtgtag

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