KEGG   Bacillus clausii: ABC2809Help
Entry
ABC2809           CDS       T00228                                 

Gene name
ligB
Definition
(GenBank) ATP-dependent DNA ligase
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
bcl  Bacillus clausii
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:bcl00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    ABC2809 (ligB)
   03410 Base excision repair
    ABC2809 (ligB)
   03420 Nucleotide excision repair
    ABC2809 (ligB)
   03430 Mismatch repair
    ABC2809 (ligB)
Enzymes [BR:bcl01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     ABC2809 (ligB)
    6.5.1.6  DNA ligase (ATP or NAD+)
     ABC2809 (ligB)
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     ABC2809 (ligB)
DNA replication proteins [BR:bcl03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    ABC2809 (ligB)
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     ABC2809 (ligB)
DNA repair and recombination proteins [BR:bcl03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     ABC2809 (ligB)
   NER (nucleotide excision repair)
    Other NER factors
     ABC2809 (ligB)
   MMR (mismatch exicision repair)
    Other MMR factors
     ABC2809 (ligB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
2942719..2943552
Genome map
AA seq 277 aa AA seqDB search
MITIFISPMLLNRIDTPTENNWLTELKFDGIRLIMSKHDGLTRLYTRHKTEVTNRFPELC
NNDIADGTILDGELIVLNDDGQPDFELVMSRFRSSKTTPLLPVQFVVFDIIKHKHTCTTA
LPLIQRKEILSKVLRPHPHMTEIKWIEGQADAYFAAVKDRELEGIVIKNPTSTYKINKRS
DDWLKVINYQYTQGLITGYRKDEFGLLLESFEGESWGVMEHMELKQRKQFYQIAKMQNVT
EGKQFVHLETPLPCRIRYRNLTRKGYLRIPTFVDWLI
NT seq 834 nt NT seq  +upstreamnt  +downstreamnt
gtgataactatctttatttcccctatgcttttaaaccgaatagatacgccgacggaaaac
aattggctaactgaactaaagtttgacggcatacgcttgatcatgtccaaacatgacggc
ttaacacggctgtataccagacataaaactgaggttacaaaccgatttcccgaactgtgc
aacaatgatattgccgacggtaccattttagatggcgaactgattgtactaaatgatgat
gggcagcccgactttgagttggtcatgtctcgctttcgatcttccaaaacaactccccta
ctacccgtgcagtttgtggtttttgacataattaagcacaaacacacctgtactactgcc
ctacccctcatacaacgcaaagagattctttctaaagtattacgccctcacccccacatg
accgaaattaagtggatagaaggccaagctgacgcttattttgctgccgtaaaagacaga
gaattagaagggattgtcataaaaaatccaacgtctacttacaaaataaacaaacgatct
gacgattggctcaaagtcattaattaccagtacacacaaggtctgattacgggatatagg
aaagacgaattcggcttgctactagaaagtttcgagggcgagtcatggggagtcatggag
cacatggaacttaagcaacgtaagcaattttaccagattgctaagatgcagaatgtcact
gagggaaaacagtttgtacatttagaaacgccgctcccgtgtaggatacgttaccgcaac
ttaaccagaaaaggctacctacgcattccaacttttgttgattggctaatatga

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