Beutenbergia cavernae: Bcav_1284
Help
Entry
Bcav_1284 CDS
T00893
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bcv
Beutenbergia cavernae
Pathway
bcv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bcav_1284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcv03021
]
Bcav_1284
03019 Messenger RNA biogenesis [BR:
bcv03019
]
Bcav_1284
Transcription machinery [BR:
bcv03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Bcav_1284
Messenger RNA biogenesis [BR:
bcv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Bcav_1284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
ResIII
Motif
Other DBs
NCBI-ProteinID:
ACQ79544
UniProt:
C5C1S6
LinkDB
All DBs
Position
1459989..1461926
Genome browser
AA seq
645 aa
AA seq
DB search
MTDTIDTAAQAAGAARGGSLTAMRLAELQQLAGSMGISGTSKMRKNDLVAAIREARAGSA
APARAPRAKRPAADEAAPTPPQPTTHAPAAAPAAALEAPRAAGASATVTERPARQPERES
APERDVPARDVPARDAGKRAARSGGEERRRSLDDITFPEPRHDGDGEGRNGQGGERNGQR
PARTGGERRDDATGERRAASVERSSDRATADRGADRGGFDDDERGGRRRRGRDRYRDRKR
RGGGRGEQAQYEEVEVTEDDVLLPVAGVLDILDNYAFVRTSGYLPGPGDVYVSLGQVKKH
GLRRGDAVTGAVRQPQDGEQQGQRQKFNALVRLDSVNGMDVERARSRPDFMKLTPLYPQE
RLRLETTPTAITARIIDLVAPIGKGQRGLIVAPPKAGKTIMMQQIANAITTNSPDVHLMV
VLVDERPEEVTDWERTVKGEVISSTFDRPASDHTMVAELAIERAKRLVELGQDVIVLLDN
MTRLSRAYNLAAPASGRILSGGVDASALYPPKKFFGAARNIENGGSLTILASALIETGSK
MDEVIFEEFKGTGNMELRLARSLAEKRIFPAIDVNASGTRREEILIPGDELKIIWKLRRV
MGALDQLPALELLLGKVREIPTNAEFLMTVQKTTPTVPGQTNELV
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacaccatcgacaccgccgctcaggccgccggcgcggcccgcggcgggtccctg
actgccatgcgcctcgcagagctgcagcagctcgcaggcagcatgggcatctccgggacg
tccaagatgcgcaagaacgacctcgtcgcagcgatccgtgaggcccgcgccggctccgcc
gcgcccgcccgcgccccgcgcgcgaagcggcccgccgctgacgaggccgcgccgacgccg
ccccagccgaccacgcacgccccggccgccgcgcccgcggccgccctcgaggccccgcgc
gccgccggagccagcgcgacggtcaccgagcgaccggcccgccagcccgagcgcgagagc
gcgcctgagcgggacgtgcccgcccgggacgtgcccgcccgggacgccggcaagcgcgct
gcacggtccggcggcgaggaacgccgtcgttcgctcgacgacatcacgttccccgagccg
cgccacgacggcgacggcgagggccgcaacgggcagggtggcgagcgcaacggccagcgc
cccgcccgtaccggcggcgagcgccgcgacgacgcgaccggcgagcggcgtgcggcgagc
gtcgagcggagcagcgaccgggcgaccgcggaccgcggcgccgaccggggcggcttcgac
gacgacgagcgcggcggccggcgtcgtcgcggccgcgaccgctaccgcgaccgcaagcgc
cggggcggcgggcgcggcgagcaggcgcagtacgaggaggtcgaggtcaccgaggacgac
gtcctgctccccgtcgcgggcgtgctcgacatcctcgacaactacgcgttcgtccgcacc
agcgggtacctgcccggccccggcgacgtctacgtctcgctgggccaggtgaagaagcac
ggtctgcgccgcggtgacgcggtcaccggcgccgtgcggcagccgcaggacggcgagcag
caggggcagcggcagaagttcaacgcgctcgtgcggctcgactccgtcaacggcatggac
gtcgagcgggcccggagccgcccggacttcatgaagctgacgcccctgtacccgcaggag
cggctgcgcctcgagacgacgccgacggccatcaccgcgcgcatcatcgacctcgtcgcg
ccgatcggcaagggtcagcgcggcctcatcgtcgcgccgcccaaggccggcaagacgatc
atgatgcagcagatcgccaacgcgatcacgacgaacagccccgacgtgcacctcatggtc
gtgctcgtggacgagcgtcccgaggaggtcaccgactgggagcgcaccgtgaagggcgag
gtcatctcctcgaccttcgaccgcccggcgtccgaccacacgatggtcgccgagctcgcg
atcgagcgggcgaagcgactcgtcgagctggggcaggacgtgatcgtgctgctcgacaac
atgacgcgcctgtcgcgggcgtacaacctcgcggcgccggcgtccggccgcatcctgtcc
ggtggtgtcgacgcctcggcgctgtacccgccgaagaagttcttcggcgcggcgcgcaac
atcgagaacggcggctccctgacgatcctcgcctcggcgctcatcgagaccgggtccaag
atggacgaggtcatcttcgaggagttcaagggcaccgggaacatggagctgcggctcgcc
cggtcgctcgccgagaagcggatcttcccggcgatcgacgtcaacgcgtcgggcacgcgc
cgcgaggagatcctcatcccgggcgacgagctcaagatcatctggaagctgcgccgcgtc
atgggggcgctcgaccagctgccggctctcgagctgctgctcggcaaggtccgggagatc
ccgacgaacgccgagttcctcatgaccgtgcagaagacgacgccgacggtccccggccag
acgaacgagctggtctga
DBGET
integrated database retrieval system