KEGG   Beutenbergia cavernae: Bcav_1284
Entry
Bcav_1284         CDS       T00893                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
bcv  Beutenbergia cavernae
Pathway
bcv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bcv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Bcav_1284
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bcv03021]
    Bcav_1284
   03019 Messenger RNA biogenesis [BR:bcv03019]
    Bcav_1284
Transcription machinery [BR:bcv03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     Bcav_1284
Messenger RNA biogenesis [BR:bcv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Bcav_1284
SSDB
Motif
Pfam: ATP-synt_ab Rho_RNA_bind Rho_N AAA_25 Spore_III_AA ResIII
Other DBs
NCBI-ProteinID: ACQ79544
UniProt: C5C1S6
LinkDB
Position
1459989..1461926
AA seq 645 aa
MTDTIDTAAQAAGAARGGSLTAMRLAELQQLAGSMGISGTSKMRKNDLVAAIREARAGSA
APARAPRAKRPAADEAAPTPPQPTTHAPAAAPAAALEAPRAAGASATVTERPARQPERES
APERDVPARDVPARDAGKRAARSGGEERRRSLDDITFPEPRHDGDGEGRNGQGGERNGQR
PARTGGERRDDATGERRAASVERSSDRATADRGADRGGFDDDERGGRRRRGRDRYRDRKR
RGGGRGEQAQYEEVEVTEDDVLLPVAGVLDILDNYAFVRTSGYLPGPGDVYVSLGQVKKH
GLRRGDAVTGAVRQPQDGEQQGQRQKFNALVRLDSVNGMDVERARSRPDFMKLTPLYPQE
RLRLETTPTAITARIIDLVAPIGKGQRGLIVAPPKAGKTIMMQQIANAITTNSPDVHLMV
VLVDERPEEVTDWERTVKGEVISSTFDRPASDHTMVAELAIERAKRLVELGQDVIVLLDN
MTRLSRAYNLAAPASGRILSGGVDASALYPPKKFFGAARNIENGGSLTILASALIETGSK
MDEVIFEEFKGTGNMELRLARSLAEKRIFPAIDVNASGTRREEILIPGDELKIIWKLRRV
MGALDQLPALELLLGKVREIPTNAEFLMTVQKTTPTVPGQTNELV
NT seq 1938 nt   +upstreamnt  +downstreamnt
gtgaccgacaccatcgacaccgccgctcaggccgccggcgcggcccgcggcgggtccctg
actgccatgcgcctcgcagagctgcagcagctcgcaggcagcatgggcatctccgggacg
tccaagatgcgcaagaacgacctcgtcgcagcgatccgtgaggcccgcgccggctccgcc
gcgcccgcccgcgccccgcgcgcgaagcggcccgccgctgacgaggccgcgccgacgccg
ccccagccgaccacgcacgccccggccgccgcgcccgcggccgccctcgaggccccgcgc
gccgccggagccagcgcgacggtcaccgagcgaccggcccgccagcccgagcgcgagagc
gcgcctgagcgggacgtgcccgcccgggacgtgcccgcccgggacgccggcaagcgcgct
gcacggtccggcggcgaggaacgccgtcgttcgctcgacgacatcacgttccccgagccg
cgccacgacggcgacggcgagggccgcaacgggcagggtggcgagcgcaacggccagcgc
cccgcccgtaccggcggcgagcgccgcgacgacgcgaccggcgagcggcgtgcggcgagc
gtcgagcggagcagcgaccgggcgaccgcggaccgcggcgccgaccggggcggcttcgac
gacgacgagcgcggcggccggcgtcgtcgcggccgcgaccgctaccgcgaccgcaagcgc
cggggcggcgggcgcggcgagcaggcgcagtacgaggaggtcgaggtcaccgaggacgac
gtcctgctccccgtcgcgggcgtgctcgacatcctcgacaactacgcgttcgtccgcacc
agcgggtacctgcccggccccggcgacgtctacgtctcgctgggccaggtgaagaagcac
ggtctgcgccgcggtgacgcggtcaccggcgccgtgcggcagccgcaggacggcgagcag
caggggcagcggcagaagttcaacgcgctcgtgcggctcgactccgtcaacggcatggac
gtcgagcgggcccggagccgcccggacttcatgaagctgacgcccctgtacccgcaggag
cggctgcgcctcgagacgacgccgacggccatcaccgcgcgcatcatcgacctcgtcgcg
ccgatcggcaagggtcagcgcggcctcatcgtcgcgccgcccaaggccggcaagacgatc
atgatgcagcagatcgccaacgcgatcacgacgaacagccccgacgtgcacctcatggtc
gtgctcgtggacgagcgtcccgaggaggtcaccgactgggagcgcaccgtgaagggcgag
gtcatctcctcgaccttcgaccgcccggcgtccgaccacacgatggtcgccgagctcgcg
atcgagcgggcgaagcgactcgtcgagctggggcaggacgtgatcgtgctgctcgacaac
atgacgcgcctgtcgcgggcgtacaacctcgcggcgccggcgtccggccgcatcctgtcc
ggtggtgtcgacgcctcggcgctgtacccgccgaagaagttcttcggcgcggcgcgcaac
atcgagaacggcggctccctgacgatcctcgcctcggcgctcatcgagaccgggtccaag
atggacgaggtcatcttcgaggagttcaagggcaccgggaacatggagctgcggctcgcc
cggtcgctcgccgagaagcggatcttcccggcgatcgacgtcaacgcgtcgggcacgcgc
cgcgaggagatcctcatcccgggcgacgagctcaagatcatctggaagctgcgccgcgtc
atgggggcgctcgaccagctgccggctctcgagctgctgctcggcaaggtccgggagatc
ccgacgaacgccgagttcctcatgaccgtgcagaagacgacgccgacggtccccggccag
acgaacgagctggtctga

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