Beutenbergia cavernae: Bcav_4075
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Entry
Bcav_4075 CDS
T00893
Name
(GenBank) putative RNA polymerase, sigma-24 subunit, ECF subfamily
Organism
bcv
Beutenbergia cavernae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF6596
Sigma70_r2
Sigma70_r4_2
TPR_2
TPR_12
TPR_21
TPR_14
TPR_10
TPR_9
Sigma70_r4
TPR_7
Motif
Other DBs
NCBI-ProteinID:
ACQ82316
UniProt:
C5C5V8
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Position
complement(4505859..4507118)
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AA seq
419 aa
AA seq
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MEAVWRIESARIVGGLARYTGDFALAEDLAQEALAEALVTWPREGVPHNPAGWLLTVGRR
RAIDTFRRRSARDERYAVLARDLDDGEAATGAPPSGDRADRDLLWDPDRIDDDILALTFT
ACHPVLSREARVALTLRVIGGLTSDEIAHAFLQPTATVQARITRAKKTLAAAQVPFEVPP
ADERRERIGSVLNVVYVIFTEGSTASSGDDLIRVDVASEALRQSRVLSRLLPDEPEVHGL
LALLELTAARFPARIGPDGEPVLLEQQDRRRWDASAIRRGRAALAHAAGLGRGLGAYGLQ
ASIAEVHAVAPSVADTDWSRVVLLYDALAELTPSPVVELNRAVAVSMERGPAAALPLVDA
LADDARLAGSHLLPSVRGELLRRMGRTDDARAELERAVALCGNARERAVLEGKLADLGA
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
gtggaggcggtgtggcgcatcgagtcggcgcgcatcgtcggcggcctcgcccgctacacg
ggcgacttcgcactcgccgaggacctcgcccaggaagcgctcgcggaggcactcgtgacc
tggccgcgtgagggtgtcccgcacaacccggcgggctggctgctcacggtgggacgccgt
cgggcgatcgacacgttccgccggcgctcggcgcgcgacgagcgctacgccgtcctcgcc
cgcgacctcgacgacggtgaggccgccaccggggcgccccccagcggtgaccgcgccgat
cgcgaccttctctgggaccccgatcgcatcgacgacgacatcctcgcgctcacgttcacg
gcctgccaccccgtgctctcgcgcgaggcgcgggtggcgctcacgctgcgcgtgatcggt
ggtctcacgagcgacgagatcgcgcacgcgttcctccagccgaccgccaccgtgcaggcc
cggatcacgcgggcgaagaagacgctggccgcggcgcaggtaccgttcgaggtcccgccc
gcagacgagcgccgcgagcggatcggttcggtgctcaacgtcgtctacgtcatcttcaca
gaggggtcgacggcgtcgtccggcgacgacctcatccgcgtggacgtggcttccgaggcg
ctacgacagtcgcgcgtgctgagccgcctcctgccggacgagccggaggtccacggcctg
ctcgccctgctggagctgacggcggcccgattcccggcgcgcatcgggccggatggcgaa
cccgtgctgctggagcaacaggaccgacggcggtgggacgcctcggcgatccgtcgcggt
cgggccgcgctcgcccacgcggccggcctcggacgcggcctcggggcgtacgggctgcag
gcgtcgatcgccgaggtgcacgctgtcgcgccatccgtggcggacaccgactggagccgg
gtggtgctcctgtacgacgctctcgccgagctgacgccgtcgccggtggtcgagctgaac
cgcgccgtcgccgtctcgatggagcgcggtccggccgccgcgctcccgctcgtggacgcg
ctggccgacgacgcccggctcgccggctcgcacctcctgccgagcgtccgaggtgagctg
ctgcgccgcatggggcgcacggacgacgcgcgggcggagctggagcgcgccgtcgccctg
tgcggcaacgcccgcgagcgcgccgtgctggagggcaagctcgccgacctcggcgcctga
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