Phocaeicola dorei HS1_L_3_B_079: GV66_14135
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Entry
GV66_14135 CDS
T03263
Name
(GenBank) pectate lyase
Organism
bdh
Phocaeicola dorei HS1_L_3_B_079
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Gene cluster
GFIT
Motif
Pfam:
XylC_M
Beta_helix
NosD
HA2_C
Motif
Other DBs
NCBI-ProteinID:
AII68770
UniProt:
A0A076IRM7
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Position
3492869..3494692
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AA seq
607 aa
AA seq
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MKKIFITTTALLIACTLSAADLFVSPKGNDRNPGTKDSPKATLTAALRQARELRRLNDES
VKGGITIHMEAGDYHLYEPVFIRPEDSGTEASPTVITSDGNAILNGGVEIRNWKKQGKLW
VADVPMFNGRPLDFRQLWINGQKAVRARDVADFEKMYRIINNDPQNEILWVPAAAVKKIQ
KARYAEMVLHEMWCVANLRIKSVEIQGDSAAVRFHNPESRIQFEHPWPRPMVTKDGHNSA
FYLTNAMELLDEPGEWYHDIESRKIYYYPRKGEKISKAVVPGIETLVWVEGTIDRPVKHI
RFDNVTFQYTTWMRPSLQGHVPLQAGMYMTDGYKIRPSMIRKNNHKLDNQGWLGRPASAV
VVKAAQDIDFEKCRFQHLGSTGIDYEWATGGGRINGCLFRDIAGNGIVAGSFSPAAHETH
LPYDPADRREVCTGLTISNNYINDVTNEDWGTLGICAGYVSDINIEHNEISDVSYSGISL
GWGWTRTVNCMRNNRVHANLIHHYAKHMYDVAGIYTLGSQPHSWITENCVSNIFSPGYAH
DPNHWFYLYTDEGSSFITVKDNWTEGEKFLKNANGPGNTWENNGPMVNDSIKANAGLTKE
YSYLKEK
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatattcataaccactactgcgctgctgatagcttgtacactatcagcagcc
gatttgttcgtatctccgaaaggtaatgaccggaatccgggtaccaaagactctccgaag
gccacccttacagccgcattgcgtcaggcaagggaacttcgtcgtcttaatgatgagagt
gtaaaaggtggcatcaccattcatatggaggcaggtgattaccatctgtacgaacccgtc
tttattcgtcccgaggacagcgggacggaagcttcacctacagtcatcacttcggatgga
aatgccattctgaatggtggggtggaaatcagaaactggaagaagcaaggaaagttgtgg
gtagccgatgtccctatgtttaacggacgtccgctggatttccggcaactgtggatcaat
ggacaaaaggctgttcgtgcaagggatgtggcagactttgaaaagatgtatcgcatcatc
aacaacgatccccaaaacgaaatactgtgggtacctgccgctgctgtaaagaaaatacag
aaggcccgatatgccgaaatggtccttcatgaaatgtggtgtgtggcaaatctccgtatc
aagtcggtcgaaatacagggagacagtgccgccgtgcgtttccataatcctgaaagccgc
atccagtttgaacatccgtggccgcgtcctatggtgactaaggatggtcacaactcggct
ttctatctgaccaatgccatggaattgctggatgaacccggcgagtggtatcatgacatt
gaaagccgtaaaatatattattatcctcggaaaggagagaagataagcaaagccgtagtt
cccggcatcgaaactttagtatgggtggaaggaactatagaccgtccggtaaagcacatt
cgttttgacaatgttactttccaatataccacctggatgcgtccctctttgcaaggtcat
gttcctcttcaggcaggtatgtacatgacagacgggtataaaatccgtccttctatgatt
cgtaagaacaatcataagctggataatcaaggttggttgggacgtccggcatcggcagtc
gtagtcaaggctgcccaggatattgatttcgagaagtgccgtttccagcatttgggctct
acaggtattgattatgaatgggccaccggtggaggacgtataaacggttgtcttttccgt
gatattgccggaaacggtattgtggcgggtagtttcagtcctgccgctcacgaaacacat
cttccatacgatcctgccgaccgtcgtgaggtctgtaccggactgaccatttccaacaat
tatatcaatgatgtgaccaatgaagactggggtaccttgggcatttgcgccggttatgta
agtgatatcaatatcgaacacaatgaaatcagtgatgtatcctattcgggcatcagtttg
ggatggggatggacacgtacagtaaactgtatgcgcaataaccgcgtgcacgccaatctg
attcatcactatgccaagcacatgtatgatgtagccggtatttatacattaggttcacaa
cctcatagctggattacggaaaattgcgtttctaacattttttcacccggttatgcacac
gatcccaatcattggttctatctttacaccgacgaaggatcttcatttatcaccgtcaag
gacaactggacggaaggagagaagtttctgaagaacgccaatggtccgggtaatacatgg
gaaaacaatggtccgatggtgaacgacagtatcaaggcaaatgccggactgacaaaggaa
tatagctatttgaaggaaaaataa
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