Brachypodium distachyon (stiff brome): 100822021
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Entry
100822021 CDS
T01717
Name
(RefSeq) CHD3-type chromatin-remodeling factor PICKLE-like
KO
K11643
chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100822021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bdi03036
]
100822021
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
100822021
Chromatin remodeling factors
NuRD complex
100822021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Chromo
ResIII
DEAD
SWI2_SNF2
AAA_14
PHD
Motif
Other DBs
NCBI-GeneID:
100822021
NCBI-ProteinID:
XP_014754890
UniProt:
A0A2K2DG99
LinkDB
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Position
2:complement(54920510..54930489)
Genome browser
AA seq
809 aa
AA seq
DB search
MQGRGGRRGRGRGKLGGAAGGGAGRPRDERAPIDPSSDDDLKSPLQIKSPNGEIACGERS
MAEMFEARLCDSPDEVSTTNLKRLRKQTVASVDATAEVNVVQVADAKLSDDEGGEMPPCR
RPKRLRRNLPARQDLKKSQDDMFVNSDDDKKSRKLVQQRRSQRLRKRFPSETFSVDVTED
KDTLQGSSDTDNDYSAPQRRSKRLHRRMKTCKDPFSDSDTVDYDQKAIPCRRISKRLQEK
RKADHESHEGCTEAQLCKLSESSSSGSDGELLRNTLKPGKNISGGPICSICKSGTGSFSL
TKCQNSRCSCSFHDFCLTPSIQDSQGTFECALCKTNQASLAKGTKVYPSKRIQRLVGHRR
VILQKSDFQYQFLVKWQLFSHHHDCWVPLDWLRDFDNLRVQSYIRKNSLPKDVYSEDQRK
PEWFVIDQAIACRLKSNPDGLCDILANCQDNKDFEGYEFLVKWKGLDYCDAAWESYFTEG
VKSAVSMLVKRHRNALNRVDCVNQMCMDSMIPETVHNGVLYDYQLQGLKWIFENYKTRKS
VILADEMGLGKTVQVVCFLSHIIKGSFTTSPALILAPKSILLQWKKEFGCWASDLNILVH
QGDKDSRKCIQAHEMYSSEGKTLFDAVVTSYEFVQIDKAVLQKIKWSTIVIDEAHRLKKL
DCNLASCLKRYSSEFRLLLTGTPLQNNMLELFSLLHYIDPDEFSDPKSDGLFLPIESGRD
LSMDEKIARIHEILKPRMLRRMKSDVLKDSMPTKKWVEVPCALTDSQRDLYINILEKNYL
KLNSAIQNGRKLSLNNIHMELRKCCNHPA
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgcaggggagaggcggaaggcgtgggagggggagagggaagctcggaggcgccgccggc
ggcggcgccggaaggccgcgggacgagcgtgccccgatcgatcccagcagcgatgatgat
ttgaagtcacctctgcaaattaagtcaccgaacggagaaattgcctgtggggagagaagc
atggcagagatgtttgaggcgcgcctgtgcgattcccctgatgaagtttcgacgaccaac
ctgaagcgtctcaggaagcaaactgtggctagcgtcgatgcaactgcggaggtgaacgtg
gtgcaggttgctgatgccaagctgagtgacgatgaaggtggtgagatgcctccatgcagg
cggcccaaacgcttacgaagaaacttacctgcaaggcaagatttgaaaaagagtcaagac
gatatgtttgtaaacagcgatgatgataagaagtcccgcaagttggttcaacaaagaagg
tcacaacgccttagaaagagatttccatcagaaactttcagtgttgacgtgactgaagat
aaggacacattgcagggtagctccgacactgacaatgattattcagccccccagcgaaga
tcaaagcgtcttcatcgcagaatgaaaacttgcaaggatccattcagtgacagtgacact
gtagattatgatcagaaggcaattccatgcagaagaatttcgaagcgcctgcaagagaaa
cggaaagctgatcatgagtcacatgagggctgcactgaagctcagctgtgtaagttgtcg
gagtcttcatcctccggatcagatggtgagttattgcgcaatactttaaaacctggcaaa
aacatttctggtggacctatttgctcaatatgcaagagtggaactggcagtttttcacta
acaaaatgccagaattctaggtgttcctgcagcttccatgacttttgtcttactccttcg
attcaagatagtcaaggcacctttgaatgtgctttgtgcaaaaccaatcaggcttcattg
gcaaaggggacaaaagtttatccctcaaaaaggatccagaggcttgtaggtcacagacgg
gtgattcttcaaaagtcggatttccaatatcagttcctcgtgaaatggcaattgttttct
catcatcatgactgttgggttccacttgattggcttcgtgattttgataaccttcgagtc
caaagctatatacggaagaattccttgcctaaggatgtctattcggaggatcaaaggaaa
ccggagtggtttgtaatagatcaggccattgcatgccgtctgaagtctaaccctgatggt
ttgtgtgacatattggctaattgtcaggataacaaagactttgagggatatgagttcctt
gtgaaatggaaaggcctagattattgtgatgctgcatgggagtcctattttactgaaggc
gtgaaatcagctgtttctatgctagtcaaaagacacaggaatgctttaaatagagttgat
tgtgtcaatcaaatgtgcatggattcgatgataccagaaactgtacacaatggtgttctg
tatgactatcagcttcaagggttgaaatggatatttgaaaactacaaaactaggaagagt
gttattcttgctgatgaaatgggtcttggcaaaaccgtacaagttgtttgctttctcagc
cacataatcaaggggagtttcaccacatctcctgcattgatccttgctcccaagagcatc
ctattgcaatggaaaaaggaatttggctgctgggcgagtgatctgaatatccttgttcat
caaggagacaaggactcgagaaagtgtatccaagctcatgaaatgtactcttctgaaggg
aagactttatttgatgctgttgtgacaagttatgaatttgtccagattgataaagcagtt
ctgcaaaaaattaaatggtcaacgattgtcattgatgaggcccacagattgaagaagctt
gattgtaaccttgcatcctgcctaaagcgatatagctccgagttccggttgctacttacg
ggaacccctttgcaaaataacatgttggaactgttttcattgcttcattatattgatcca
gacgagttctctgacccaaaatctgatggattgttcctaccaattgaatctggacgggat
ttgtcgatggatgaaaaaattgctcgcattcatgaaattttaaagcctagaatgctgagg
cgaatgaaatctgatgtcctaaaagattctatgcccacaaagaagtgggtagaagttcca
tgtgcacttacggattctcagagagacctctacatcaatattttagagaagaactacttg
aagttgaacagtgctattcagaatggcaggaagctttcgctgaacaacatacatatggaa
ctgagaaaatgctgcaatcacccggcctag
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