Brachypodium distachyon (stiff brome): 100829985
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Entry
100829985 CDS
T01717
Name
(RefSeq) transcription initiation factor TFIID subunit 4b
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100829985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdi03021
]
100829985
03036 Chromosome and associated proteins [BR:
bdi03036
]
100829985
Transcription machinery [BR:
bdi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100829985
Coactivators
SAGA/TFTC/STAGA complex
100829985
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
100829985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
Motif
Other DBs
NCBI-GeneID:
100829985
NCBI-ProteinID:
XP_010233274
UniProt:
I1GQP3
LinkDB
All DBs
Position
1:complement(12803912..12815983)
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AA seq
844 aa
AA seq
DB search
MDPIMKLLEDDEEDESMHSGADVEAFTAALNREVEGSASSCAAGSSSKTLDHGAGTLPQE
SNPVVNHSHGLWQNSVKNDTGNQESQQQEQKHLYCKNEQSSVPEAVPVGADNKHLHSSTQ
NECDQLKVKQETGNNAQQTSVGQQQPLQQMKSQQSPGTNLTNSPTTVGKAPVVTFHMLIP
ILRRFLDKDKDIQVQSIFAKLRKNEVSKEHFLKVIRTIVGDKLLKQAASQYQMQAAQAQR
SAQANPSNLSLLGQVSGQQNENPRPPQFRSSSGQMQSNMDYPASERNLQKPNETGNMSDR
KGVHMLQSRPSNIHPVSVQATQHHVQRPQTSLPVYGVNNIHARPFPTSVGGPTAPFRPHM
ADSSQRGQLVQGGVTTVSGSVAPRPALQNNQPSRQQPANKNQKSNSFTPAVHMNNEASNQ
PSESTQSSFAASNAKQLNPTLLSSKGGGVLENQASMTTSKSLTTATSSQPHRSHGTAAEL
AIQIQSGTQAPPSGAASKTPQKKPSAGQKKPLEAIGSSPPPSSKKQKGSGGFHDQSIDQL
NDVTAVSGVNLREEEEQLFSAPKDESRVSEAARKVVQLEEERLILQKGPLTKKLAELMRR
YDLKSIGSDVERCLSMCVEERLRGFISNIIRLSKQRVDVEKSRHQFYPLSSDVRSHILRV
NREAREQWERKLAEDADRIRKQSDGDDTAAVSSEKDKNEGRGTSKHAKAYKEEDDKMRTT
AANAAVRVAAGGDDMLSKWQLLAERHKQRGEVGDGSSSSLPGTMSPNKPSPKPGKGSRGQ
QETEKRGCFSVLGPGGVRRSAHVKVARSITVKDVVAALEREHQMSKSPLLFRLHGRPLTE
PAAK
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggatcccatcatgaagctcctcgaggacgacgaagaggacgagagcatgcactcgggc
gccgacgtcgaggccttcacggcggcgctgaaccgcgaagtggagggcagcgccagcagc
tgcgccgccggctcctcctccaagacgctggatcacggcgccggtacattacctcaggaa
agcaacccagtagtaaaccacagtcatggactgtggcaaaattcagtgaagaatgacact
ggaaatcaggagagccagcaacaggaacaaaaacatttatattgtaaaaatgagcagtca
tccgtacccgaagcagttcccgtaggtgcagataacaaacaccttcactcgagtactcag
aatgaatgtgaccagctaaaggttaagcaagagacaggaaacaatgctcagcaaactagt
gttggtcagcagcaacctttgcaacaaatgaagagtcaacaatcacccggcacaaaccta
accaacagtccaactacggtgggaaaagctcctgttgttacatttcatatgctaatcccg
attttgagacgcttccttgacaaagacaaggatatacaagttcagtccatttttgcaaag
ttgcggaaaaatgaggtcagcaaggaacactttttaaaggttattaggacaattgttggt
gataaattgctcaagcaagctgcttcgcaatatcaaatgcaggctgctcaggcacaacgg
agtgcacaggcaaatccaagcaacctttctttgttaggtcaagtttcaggccagcaaaat
gagaacccaagaccacctcaatttcgttcttcatcagggcaaatgcagagtaacatggat
tatccagcttcagaaaggaatttgcagaagcctaacgaaactggtaacatgtcagatagg
aaaggagtgcatatgctacaaagccgtccatctaacatccacccagtctcggtgcaagca
acacaacatcatgtgcagcgtccacagacatcgttgccagtgtatggggtaaataatatt
catgcccgtccatttcccacatcagttggaggtccgactgcaccatttagaccacacatg
gcagattccagtcaaagaggacaattagtccagggaggtgttacaactgtctccgggagt
gtggccccacgaccagcattgcaaaataatcaaccgtcacggcaacaaccagcaaacaag
aaccagaagagtaattctttcaccccagcagtacatatgaacaacgaagcttctaaccaa
ccctctgaatccacacagagttcttttgctgcctcgaatgcaaaacaactcaatccaacc
cttttatcttcaaagggtggtggtgttcttgaaaaccaagcatctatgaccacttctaag
tctttgactacagcaacctcaagtcaacctcatcgatctcatggaactgcggcagaactt
gccatccagatccaatctggtacccaagcacctccttctggagcagcttccaaaacacct
caaaagaagccatctgccggacagaagaaacctttggaagcaattggctcatccccacca
ccatctagcaaaaagcagaagggatctggcggtttccatgatcaaagcattgaccagctg
aatgatgttactgcagttagtggtgttaacctgagggaagaagaggagcaacttttttct
gccccaaaggatgagagtcgagtttcagaagctgctcggaaagttgtacaactggaagaa
gaaaggctcatcctacagaagggacctctgacaaagaaattagcagagctcatgaggaga
tatgatctgaagagcataggcagtgatgtggagcgttgtctatcaatgtgcgttgaggag
cggttacgaggatttataagcaatataataaggctttcaaaacagagggttgatgttgaa
aaatcaagacatcagttttatcctttatcttctgatgttcgtagtcatatattgagggtg
aaccgggaagctagagaacagtgggagagaaagctggctgaagatgccgacagaatcagg
aaacaaagtgacggagatgatactgcagctgtttcttcagagaaggataaaaacgagggt
cgtggcacatcaaagcatgctaaggcttacaaggaggaagatgataaaatgagaacaaca
gctgcaaatgctgccgtgcgagttgcagccgggggggatgacatgctttcaaagtggcaa
ttactagctgaacgacataaacagagaggtgaagtaggtgatggttcttccagctccctg
ccaggtaccatgtcgcctaacaagccatcaccaaaacctggaaaaggctcaagaggacag
caggaaactgaaaagcgaggctgtttttcagtgcttggacctggcggcgttagaaggtca
gcacacgtgaaagtggcacggagcatcacggtcaaggatgtggttgcagcactagagaga
gagcatcagatgtcgaaatcgcctttactatttcggctacatggaagaccgctcacagaa
cccgctgctaaatag
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