Brachypodium distachyon (stiff brome): 100838443
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Entry
100838443 CDS
T01717
Name
(RefSeq) prolycopene isomerase, chloroplastic isoform X1
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi00906
Carotenoid biosynthesis
bdi01100
Metabolic pathways
bdi01110
Biosynthesis of secondary metabolites
Module
bdi_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
100838443
Enzymes [BR:
bdi01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
100838443
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GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
GIDA
HI0933_like
Thi4
FAD_binding_3
Pyr_redox_2
GDI
GMC_oxred_N
Motif
Other DBs
NCBI-GeneID:
100838443
NCBI-ProteinID:
XP_003561798
UniProt:
I1H789
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Position
1:66362126..66367949
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AA seq
591 aa
AA seq
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MTLLLSPAAAKSLHAPLPLQSAAAAAHPSRFRPLGGESRGGRGRAAVVSEKQAAAVVAEK
PLVVEGEGSSGERYDAIVVGSGIGGLVAATQLAAKGARVLVLEKYVIPGGSSGYYRRDGF
TFDVGSSVMFGFSDKGNLNLITRALEAVGCKMEVIPDPSTVHFHLPGDLSILVHREYNDF
IKELVRKFPHEKEGILKFYGICWKIFDSLNSLELKSLEEPLYLFGQFFKKPLECLTLAYY
LPQNAGDIARKFIKDQQLLSFIDAECFIVSTVNALQTPMINASMVLCDRHFGGINYPVGG
VGGIAVSLANGLVDKGSEIRYKANVTNVILENGKAVGVRLSNGKEFFAKTVISNATRWDT
FGKLVKVEELPEEEKNFQKNYVKAPSFLSIHLGVKASALPSGTDCHHFVLEDDWSNLEKP
YGSIFLSIPTVLDPSLAPEGHHILHIFTTAGIEDWEGLSRNDYEQKKELLANEIIQRLEK
KLFPGLQDSIVLKEVGSPKTHRRFLGRNEGTYGPMPRGIPKGLLAMPFNTTSIDGLYCVG
DSCFPGQGVIAVAFSGVMCAHRVAADIDLEQRSPILDTGLLGILRWLRTLA
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgacgctcctcctctcgcccgccgctgcgaagagcctccacgcaccgctccccctccaa
agcgccgctgcggccgcccatccttctcgtttccggcccctcggtggtgagtcacgcggc
ggcagggggagagcggcggtggtgtcagagaagcaggcggcagcggtggtggcggagaag
ccgctggtggtggagggggaagggagcagcggggagcgctacgacgcgatagtggtcggg
tcggggatcggagggctggtggcggcgacgcagctggcggctaaaggggcgcgggtgctg
gtgctcgagaagtacgtcatccccggaggcagctccgggtactaccgccgcgacggcttc
accttcgacgtgggctcctccgtcatgtttggattctccgacaagggaaacttaaatttg
attacacgagcactagaagcagttgggtgtaagatggaagtcatacctgatccttctacg
gttcatttccatctacctggtgatctctccattcttgtgcacagggagtacaatgacttc
atcaaagagttggttagaaaattccctcatgaaaaagaagggatcctaaaattctatggc
atatgttggaagattttcgattcattaaactctttggaactcaagtccctggaggaacct
ctatacctttttggccaattttttaagaagcctctggaatgcttgactctcgcatattat
ctgccacagaatgctggggatattgcccgcaagttcattaaggatcagcagttactgtcg
ttcatagatgctgagtgttttattgtgagcacagtcaatgccttgcaaacacccatgatc
aatgcaagcatggtcttgtgcgataggcactttgggggaattaattatccagttggcggt
gttggtggtattgcggtgtccttggcaaatggccttgttgacaagggcagtgaaatccgt
tacaaggcaaatgtaaccaatgttatccttgaaaatgggaaagctgttggggtgaggttg
tcaaacgggaaggagttctttgctaaaacagtcatatcaaatgcgacgagatgggacacg
tttggaaaactcgtgaaagttgaagagcttccggaagaggagaaaaactttcagaagaat
tatgttaaggcgccatctttcctttctattcatctgggcgtcaaagcctcagctttacct
tctggtactgattgtcaccattttgtattggaggatgattggtcaaacttggagaagcct
tatggaagcatatttttaagtatccctacagttcttgatccatcattggctcccgaagga
catcacatacttcatatatttacaactgcaggcattgaagattgggagggtctatctagg
aatgactatgagcagaaaaaggagcttctggcaaatgagattatacaaaggcttgagaag
aagctgtttcctggtcttcaagattcaatagtcctcaaggaggtaggatcaccaaaaact
cacagaagatttcttggacggaacgagggcacatacggacccatgccacggggtataccc
aagggattgctggccatgcctttcaatactacttcaatagatggactttactgcgttggt
gatagctgttttcctgggcaaggtgtaattgcagtggccttttcaggggtcatgtgtgct
catcgagttgcagcagatatagacctcgaacaaagatcgcctattctagacactggtctt
ctcgggatcctgagatggttgagaacactcgcatag
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