Brachypodium distachyon (stiff brome): 100838541
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Entry
100838541 CDS
T01717
Name
(RefSeq) WD repeat-containing protein 7
KO
K24738
rabconnectin-3b
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100838541
Membrane trafficking [BR:
bdi04131
]
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
100838541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Motif
Other DBs
NCBI-GeneID:
100838541
NCBI-ProteinID:
XP_014752430
UniProt:
A0A0Q3NLE5
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All DBs
Position
1:complement(36598462..36611648)
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AA seq
1456 aa
AA seq
DB search
MKCHSVAALWSPSPPSHHITAVAATPAALFTGAADGTVLHWPLPPSPPFHLRPCSLLCAH
AAAITALCPLPSPASLLVSCSAGVLSLFSASASLRCLRRRSLPPWAGSPCLVAPLPSSSS
TSSTLRVAILCHAHDDGHGHRHVSAVVVIDARTLVVLHTAFHGALSVAPPKAITVTVNSD
DNAVTVVLADAQGRTQMVPVVEVSAIEGDSPRRLSVSSLSSVASAEAPDGMVEAVALSDD
GKVVALVLKTSCFLKCVLEGSLLGEVSLANTSLCNEEDAGVTGCLAGGFFLHGGEWGSRH
SEDGSVVRSLVLWSSNGGAMLYRVVVGTPSFVCEAVCAIPSIASEQGQRSSVQCCQMDNC
LIRVESCPYKICGSVLWKPHISIWSMNQLELSVPKNAENPPFSKVLGEGSLQGEEFMSEP
SHSLPKSDNGLEISSHMCSSYNDGPGRYGRTVSSSMVLSEDSYAPYAVVYGFHNGDIEVI
RFLNLLPAAKFGTGGAYPHISERFFLGHKGAIICLAAHHMHVHSDSRSFQRALISGSLDC
TIRVWDLDAGTLLSVMHHHVASVNQIVLPPAWTHHPWDDCFISVGEDGLVALVSLETMRV
ERMFPGHSCYPSMVAWDGVKGYIACLCRSLHSCNDAGSILYIWDMKTGARERIVRGTASQ
SAFEHFCKGISRNKVTGGFLGGTTSASSLLVPVFKEITLLQSDGNKNGHNISSVSKNYHN
AADSVALSAPTAHDVKGKTPAPDDRDNSGYISGKFGCAQIINKRRKYRIKCSCPYPGIAS
LRFDLTAIMSAQGMSNSNSDRHLGDQLCNDHIKETVKPGAFDNTSRGHEMDSPSRESLEG
QLLRFSLCFLHLWDVDCELDKLIVDEMQICKPEGCHIATGVVGDRGSFTLMFPGKEATLE
LWKSSAEFCAMRSLTIVSLAQRMITLSRSCTNASSALAAFYTRHFAEKVPDIKPPSLQLL
VSFWQHPSEHVRMAARSLFHCSALRSVPQPLRIQRSKIPDVHLSPSDHMDKLIPAIQNAS
LSRYGQLKADGENLDRDADDTSQINSWLESFENQEWLSWIGGTSQDAVASNIIVAAAFVV
WYPSIVKVKLAKLVVNQLIKLVMSMNDRYSSTAAELLAEGMESTWKACLGTDIAHFMSDV
LFQIECLSSAPSSNAMYKTAVAVTMREALVGTLLPSLAMADIMGFFGVIESQIWATSSDS
PVHVVSLKTLIRVVRGSPKALAPYLDKAISYILHTMDPSNLIMRKACIINSMMALREIAR
VFPMVALNESMTRLAIGDAIGEINSATIRVYDVESVTKIRILDACGPPGLPSFLEGPSNT
TTTILITALSFSLDGEGLVAFSENGLMIRWWSLGSAWWERLSRSLTPIQCTKLIYVPPWE
GFSPNSARLSIICNILGHDSHRNSETKTRELDEADNLKLLLHNLDLSYRLHWVGVKTIRL
ARIIDYMKVSRRGCSV
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgccactcggtggctgcgctctggtcgccgtcgcctccttcccaccacatcacc
gccgtcgccgcaacccctgccgcgctcttcaccggcgccgccgacggcaccgtcctccac
tggcctctccctccttccccgcccttccacctgcgtccctgctcccttctctgcgcccac
gccgccgccatcaccgccctctgtcctctcccctcccccgcctccctcctcgtttcctgc
agcgccggcgtcctctccctcttctccgcttccgcctctctgcgctgcctccgccgccgc
tcgctcccgccctgggccggttccccttgcctcgtcgcgccccttccctcctcctcctcc
acttcgtcaaccctccgtgtcgcgatcctctgccacgcccacgatgacggccacggccac
cgccacgtgtccgcagttgtggtcatcgacgctcggacccttgtcgttcttcacaccgcc
ttccacggcgccctttcagtcgcgcccccgaaggcaatcactgtcacggtcaacagcgac
gacaatgccgtcactgttgtgctggctgacgcgcaggggcggacacagatggtgcccgtg
gtggaggtctcggccatcgagggcgactcaccgaggcggctcagcgtgagctccttgtcc
agcgttgcatccgcagaggcaccggatggtatggtggaggccgtggctttatctgatgat
gggaaggtcgttgctttggtgctgaagacgagctgtttcttgaaatgcgttctcgagggt
tccttgctgggtgaagtgtctctggccaatacttcactatgcaacgaggaggatgcaggg
gtcacgggttgccttgctggaggtttttttctccatggtggggagtggggatcccggcat
tcggaggatggcagcgtggtcaggagcttggtgttgtggagtagcaatggtggtgccatg
ttgtacagggttgtggttggtactccatcgtttgtgtgtgaggctgtatgtgcaatccct
agtattgcatctgagcagggacagaggtcatcagtgcaatgttgccagatggacaactgt
cttattagggtggagtcttgcccgtataagatctgtggttctgtgttgtggaaaccccat
atctccatatggtctatgaatcaactagaattgagtgttccaaagaacgcagagaaccca
cctttcagcaaagttcttggagaaggcagtctccagggagaagaatttatgtcagaaccc
tctcattcactgcccaagtcagacaatggattggaaattagttcacatatgtgctcatca
tacaacgatggaccggggaggtatggaaggactgtgtcttcttcaatggtactttctgag
gattcttatgctccatatgctgtagtttatggtttccataatggtgacatagaagttatc
cgatttctcaacctgttgccagctgcaaaatttggtactggaggtgcttacccacatatt
tctgaaagattttttttggggcacaagggagcaattatttgcttggctgcgcaccatatg
catgtgcactctgactcccgaagcttccaacgagcactcatctcggggagtttggattgc
acaattcgtgtctgggatctagatgctggcaccctcctttctgtgatgcatcaccatgtc
gcgtcggttaaccaaatagtactgccaccagcttggactcatcatccttgggatgactgt
tttatttctgttggagaagatggccttgtagcacttgtttctcttgaaactatgcgtgtt
gagaggatgtttcctgggcattcatgttacccatcaatggttgcttgggatggagtaaaa
gggtacatagcttgtctatgccggagtctgcactcctgtaatgatgcaggtagcatattg
tatatttgggatatgaaaacaggtgctcgagaacgaattgttagagggacggcatctcaa
tcggcatttgaacacttctgtaagggaatttccagaaataaagttactggtggcttcttg
ggagggacaacttcagcttcttccttacttgttccagttttcaaagagataacccttctt
caatctgatggaaataaaaatggacataacatttcatctgtatcaaagaactatcacaat
gctgcagattctgttgctttgagtgcccctactgcacatgatgttaaggggaaaacacca
gctccagatgatagagataattctggatatatttcaggaaaatttggctgtgcccagatc
attaacaaaagaagaaagtatcgcataaagtgctcctgtccatatcctggcattgcaagt
ctgagatttgacctcacagcaatcatgtctgcgcaaggcatgtcaaacagcaatagtgat
aggcatttaggagaccaactttgtaatgatcatatcaaagaaactgtaaagcctggagct
tttgataatacttctcggggccatgaaatggatagcccatctagagagtcattggagggc
caattactccgatttagtctctgttttctgcatttgtgggatgttgattgtgagctagac
aaattgattgttgatgagatgcaaatttgcaagccagaaggctgccatatagctacaggg
gtggtaggggacagaggctcgtttacattgatgttcccagggaaagaagccactcttgag
ctttggaagtcatccgctgaattttgtgctatgagatcgttgacaattgtttctcttgcc
caacgcatgatcacgctatctcgttcttgtacaaatgccagcagtgccttggcggctttt
tatacaagacactttgctgagaaagttccagatataaagcccccatccctccagcttctg
gtgagcttttggcaacatccttctgaacatgtgcgaatggctgcccgctccttatttcac
tgctcagctcttcgttctgttccacaaccgctccgcatacagagaagcaaaatacctgat
gtccacttgtctccatctgatcatatggacaagcttatcccagcgatacagaatgcctca
ttatctaggtatggacagttgaaggcagatggtgaaaatcttgatagagatgctgatgat
acttctcagataaactcatggctggaatcatttgaaaatcaggagtggctatcatggatt
ggagggacaagccaggatgcagtggcatcaaatatcattgttgcagctgcttttgttgtt
tggtacccgagcattgtgaaagttaagcttgcaaagctggttgttaatcaactaatcaag
ttagttatgtccatgaatgatcgttacagttcaactgcagctgaacttctagcggaggga
atggaaagcacatggaaagcatgtttgggtactgacatagctcatttcatgagtgatgtc
cttttccaaattgagtgtctaagtagtgcaccttctagcaatgccatgtataaaactgca
gttgctgttacaatgagggaggccttggttggtactcttctaccaagcttggcaatggct
gacataatgggattttttggtgtaatagaaagtcaaatttgggctacttcatctgattca
cctgttcatgtagtttctctcaaaactctcatccgagtagttcgaggctctccaaaggcc
ttggctccttatcttgacaaggcaatcagctatattctacacacaatggatccaagcaat
ttaataatgcgcaaagcttgcattattaactcaatgatggctttaagagaaattgcacgt
gtatttccaatggttgctctcaatgaatcaatgacaagattagctattggtgatgctatt
ggagagatcaacagtgccacaattcgtgtttatgacgtagaaagtgtcacaaaaataagg
attcttgatgcatgtggaccaccaggtcttccaagctttcttgaaggaccatcaaataca
acaacaaccatactgataacagctttgagtttctcactggatggagagggtcttgtcgca
ttttccgagaatgggttgatgattagatggtggtctctaggttcagcctggtgggagagg
ctaagcagaagccttactcctatccaatgcacaaagcttatctatgttcctccatgggag
ggattttcacccaactcagctcgtctaagtataatttgtaacatattgggacatgatagc
catcgaaattcagagactaagacgagggaactagatgaggctgataatctgaagctgttg
ctacataatcttgatctttcttaccgccttcattgggttggtgtcaagaccattagactt
gcaaggattattgattacatgaaggtgtctagaagggggtgttctgtttaa
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integrated database retrieval system
