Brachypodium distachyon (stiff brome): 100844786
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Entry
100844786 CDS
T01717
Name
(RefSeq) myosin-11 isoform X1
Organism
bdi
Brachypodium distachyon (stiff brome)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NT-C2
Shugoshin_N
ATG16
CLZ
Motif
Other DBs
NCBI-GeneID:
100844786
NCBI-ProteinID:
XP_010234977
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All DBs
Position
3:complement(34873859..34884564)
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AA seq
1743 aa
AA seq
DB search
MSKLKLALSQDGHGERMEFRFSGLRAVKVPVVSDRLLIKIISVVNGTTIAKSSKAAALNG
ICQWPKSILVPMWFSQDEVSKEFHERQCKIVVSMGSSKTAVLGEVFLNLTNYLSSSDSTA
ISLPLKRCNSGTVLQLKIRCLGARSKPSGRLWDELSLRLDDCSPTEDDMGIKSDGSNSML
NKSAQSLSEIHLGSVYQDEAGNGDASFSAPESHQNSNSGDGTTNREVPSPRDNSNEGSLM
GRQDSASYASHDYADHGDDSSRSILDTAEETTEDGKKMLERHSGNFKIETETVKNECADK
PKQQAEIALELSASYSEQDSLRQEMEELKSSLGEVTAHQTIAGTPKSGGAIVLQNEVIDE
VQFLKLSNANLTAQLSKTQEANIELVSILQELEETIEIQRVEMSKVPHMNDVVDHEVSKS
DLTVQEAAELARMLSLKEDEITFLREKLDRILNIEKVDGARPDAIYLELEKENDFLKVKI
QELENEFSELTEENLKLIYKLKEVNGVGKGEDPCISNSEEMSSVERSTSNVKDLERKCAD
LELNLLNFRTEFNGLEENFQKSQEELKERTLELSEMREKLFHATELEGLESGSARRDQLG
SGEPDDTETDLDLMKHSVLLKEQEIEGLLHSAKEMENIISDIQKEKNQLEEERLAASLKE
SSMTLKSLDEVREDLIVLTSSLDSHVSANKVLENKISELESSKIGLESHVSKLENENIEL
SEFISELEAQLTSLTSENESTKLQMDDYRSLIINLKDEVDQQQAEMGSQKLHVSKLEHEN
VELSEFIFEMEAQLTSLTSEIESTKLQMDDSRSLITNLKDKVEQQQAEMEAQKLHVSKLE
DENIELANFISELEAQLTSLTNENESTKLQMDDSRSLITNLKDKVEQQQAEMEAQKLHAS
KLEHENIELSKLISELEAQLTSMTSENESNKEMDDSGSLITNLKDQVEQQQAEMEAQKLL
VSKLEHENIELSKLISELEARLTSLTSENESSKQLDDSGSLVTNLKDQVEQQQAEMEAQK
LLVSKLEHENIELSKLISELEAQLTSLTSENEPTKLQMDNSGSLSTNIKDKVEQQQAEME
AQKLHVSKLAHENIELSKLISELEAQLTSLTSENESTKLQMDDSGSLITNLKDKVEQQQA
EMEAQKLHLSKLEHENIELSKVISELEAQLTSLTSENESTKLQMDDSGSLVINLNYKVEQ
QYAEMEAQKLHVSKLEHENIELSRFISELEAQLTSLTSENDSTKLQMDNSRSLITNLKDK
VEQQHAEMESQMLELKQKYLESQRRLSEVQEDSEALRRSNSKLQATADSVVEECNSLQTL
TADLKMQKLELHGRSTQLEQELDQSKRKMMDFCKTVEFLEAKLSSLQKEITSKEQSLLAE
LENIFQEHKEHEERITRAHFLLNKIENEKIAEVKNLEREVMSLTAQVSSTDGERGSADLD
SIHEVSILRADKANLEDANAQMRHYESQLEDLHKESKTKIKGMADSLNASKQNEGMLTTD
VEHMRGLMEAARSNEESLRKTSDELELRYKSSDYEKQQIMEEICGLKIQVNKMTSLQDEV
FNLKSSLEQAKFEKGKLEEHLQSLSEECEEVKTQKAMLTDKLSYLQSTLHDAGDENHSKS
MQEKLIINQGNDDVANGNGSTPVNEDPDIQSKIQLLETRLAEALEENKLYRAQLQSPTEE
GQSSNRDEMDNNGNSKIAQLESELNDMQERLLTVSMQYAEVEAQREELVMELKNANAKKG
RWF
NT seq
5232 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagctgaaactggccctctcgcaggatgggcacggcgagcgaatggagttcagg
ttctccggcctccgcgccgtcaaggtaccagtagtatcagataggctactcattaaaatt
atttcagtggtcaatggaacaacaattgccaagtccagtaaagcggctgcccttaatggg
atctgtcaatggcctaaatccatcctggtaccaatgtggttttctcaagatgaagtgtcg
aaagaatttcacgagcgtcagtgcaagatcgttgtttccatgggatcatcaaaaactgct
gttctcggggaagttttcctaaatttgactaactatctcagttcatcagactcgacggct
atctcgttgccgttgaagaggtgcaattctggcacagttttacagcttaaaattcgttgt
cttggtgcaaggtctaaaccaagtgggcgattatgggacgaactatctcttcgtcttgat
gactgtagtccaaccgaagatgatatgggcataaagtcagacggctctaacagtatgttg
aacaagagtgctcaatctttatcagaaattcatttaggaagtgtttaccaagatgaagct
ggaaatggggatgcaagtttctcagcaccagagtctcatcaaaattctaattctggagat
ggcaccacaaacagagaagttccgtctcctagggacaactcaaatgagggatctctcatg
gggaggcaagactctgctagttatgccagccatgattatgcagatcatggtgatgattca
tccagaagtatcctcgacaccgccgaagaaacaactgaagacggcaaaaaaatgttggag
agacattctggcaattttaaaatcgaaactgagacagtgaagaatgagtgtgctgacaaa
cccaagcaacaggctgagatagcgctcgaactttctgcttcatattctgaacaggattcc
ttaagacaagaaatggaagaactgaaatcatctctgggggaggtaacggcacatcaaact
atcgcaggaactccaaaatctgggggtgcgatagttctccagaatgaagttatagacgag
gtgcagtttctgaaactatcaaatgcaaacttaacagcccaactgagcaaaacccaagag
gccaacatagagcttgtttctattcttcaagaactggaggaaacaatagaaatacagaga
gtggaaatgtcaaaagttccccacatgaacgacgtggttgatcatgaggtctccaaaagt
gatttgacagttcaagaagctgcagaattggctagaatgctgtcactaaaagaagatgaa
atcacatttttgagggagaagttggatcgtattctcaatatagaaaaagtcgatggtgca
cgtcctgatgcaatttatcttgaattggaaaaggagaatgattttttgaaggtcaaaata
caggagcttgagaatgaattttctgaattaactgaggaaaatttgaagcttatatacaag
ttgaaagaagtaaatggggtaggaaaaggagaggatccctgcatttctaacagtgaggag
atgtccagtgtagagagatcaacatctaatgtaaaagacctggagagaaaatgtgctgac
cttgagctgaatctgctgaattttaggactgagttcaatgggctagaagagaatttccag
aaaagccaagaggagttaaaagagagaacacttgaattgtctgagatgagagaaaagctt
ttccatgccactgagctggagggactggaatcgggtagtgcaagacgtgaccaattggga
agtggagaacctgatgatactgaaactgacttagatttgatgaagcatagtgttctgctg
aaagaacaggagattgagggtttgctacattctgcaaaagaaatggagaacatcatttct
gatatccagaaggagaagaatcagttggaggaggaacgtttggcagcatcacttaaagaa
agtagcatgactttaaaatccttggatgaggtgcgagaagatctcattgtgcttacgagc
agtttagattcccatgtttctgccaataaggttcttgaaaataagattagtgaacttgaa
agctccaaaatcggactagagtcgcatgtatcaaagctggaaaatgagaatattgagctg
tcagagttcatatctgaactggaggcacagctgacttctctgacaagtgaaaatgagtca
actaagctacaaatggatgattatagatcactcatcataaatcttaaggatgaagttgat
caacagcaagcagagatgggatctcaaaagttgcatgtatcaaagctggaacatgagaat
gttgagctgtcagagttcatatttgaaatggaggcacaactaacttctctgacaagtgaa
attgagtcaactaagctacaaatggatgattctagatcacttatcacaaatcttaaggat
aaagtagaacaacagcaagcagagatggaagctcaaaagttgcatgtctcaaagttggaa
gatgagaatattgagttagcaaacttcatatctgaactggaggcgcagctaacttctctg
acaaatgaaaatgagtcaactaagttacaaatggatgattctagatcacttatcacaaat
cttaaggacaaagtagaacagcagcaagcagagatggaagctcaaaaattgcacgcatca
aagttggagcatgagaacattgagctatcaaaattgatatctgaactggaggcacagctg
acttctatgacaagtgaaaatgagtcaaataaagaaatggatgactctggatcacttatc
acaaatcttaaggatcaagtagaacagcagcaagcagagatggaagctcaaaaattgctt
gtatcaaagctggagcacgagaacattgagctatcaaagttgatatctgaactggaagca
cggctgacttctttgacgagtgaaaatgagtcaagtaaacaactggatgattctggatca
cttgtcacaaatcttaaggatcaagtagaacagcagcaagcagagatggaagctcaaaaa
ttgcttgtatcaaagcttgagcacgagaacattgagctatcaaagttgatatctgaactg
gaggcacagttgacttctctgacaagtgaaaatgagccaactaaactacaaatggataat
tctggatcacttagcacaaatattaaggataaagtagaacagcagcaagcagagatggaa
gctcaaaagttgcatgtatcaaagctggcacatgagaatattgagctatcaaagttgata
tctgaactcgaggcacaacttacttctctgacgagtgaaaatgagtcaactaagttacaa
atggatgattctggatcactcatcacaaatcttaaggataaagtagaacagcagcaagca
gagatggaagctcaaaagttgcatctatcaaagctggaacatgagaatattgagctatca
aaggttatatctgaactggaggcacaactgacttctttgacaagtgaaaatgagtcaact
aagttacaaatggatgattctggatcacttgtcataaatcttaattataaagtagaacag
cagtatgcagagatggaagctcaaaagttgcatgtatcaaagctggaacatgagaatatt
gagctgtcaaggttcatatctgaactggaggcacagctgacctctctgacaagtgagaat
gactcaactaagctacaaatggataattctagatcacttatcacaaatcttaaggataaa
gtagagcagcagcatgcagagatggaatctcaaatgttggaacttaagcaaaaatattta
gaatctcaaagaagattgtcagaagtacaagaggattcagaggctctaagaaggtcaaac
tcaaaattacaggccacagctgatagtgtcgttgaagaatgcaattctcttcagactctg
acagctgacctaaagatgcagaagctggaattacatggccgttctacacagcttgagcag
gaattagatcaatcaaaaagaaagatgatggatttttgcaaaacagtggagttcctggag
gcaaaactttcttcacttcagaaagagataacttcaaaagaacaatctttgcttgcagag
ctggagaatatattccaggagcataaggaacacgaagaaaggataactcgtgcacatttc
cttttaaacaagattgagaatgaaaagattgctgaagtgaagaatcttgagagggaggtc
atgagccttactgcacaagtgtcctcaacagacggggagcgaggaagtgctgacttggat
agcatacatgaggtctccatcctgcgagcagacaaggctaatcttgaagatgccaatgct
cagatgagacattatgagtctcaattggaagaccttcataaggagtctaaaaccaaaatt
aaaggcatggctgattcacttaatgcatctaaacagaatgagggaatgctgacaacagat
gttgagcatatgagaggattgatggaagctgctagatccaatgaagaaagcctaaggaaa
acttcagacgaactagaattgaggtacaaatccagtgattacgagaaacagcaaataatg
gaagaaatttgtggactaaaaatccaggtcaacaaaatgacaagcctccaagatgaagtt
ttcaatctaaaaagttcccttgagcaagctaagtttgaaaaagggaaattagaagagcac
ctgcagtcattgtctgaagaatgtgaagaggtaaagacacaaaaggccatgctaacagac
aaactctcctatctccagagtactttgcacgatgctggtgatgaaaatcatagcaaatcc
atgcaagaaaagcttataataaatcagggtaatgatgatgttgctaatggtaatggaagt
actcctgttaatgaggatccagacattcaatcaaagatacagttactggaaactagactt
gccgaagcattggaggaaaataaattgtacagggcacaactgcaaagtccaacggaagag
gggcaatctagtaacagagatgaaatggataataatggtaacagcaagatagcacaactg
gagtcagagctaaacgacatgcaggaacggttactcactgtgagcatgcagtatgcagaa
gtagaggctcaacgggaagaattagtgatggagttaaaaaatgcaaatgcaaagaaggga
cgatggttctag
DBGET
integrated database retrieval system
