Bifidobacterium dentium JCM 1195 = DSM 20436: BBDE_1673
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Entry
BBDE_1673 CDS
T04222
Name
(GenBank) conserved hypothetical protein
Organism
bdn
Bifidobacterium dentium JCM 1195 = DSM 20436
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
UvrD-helicase
UvrD_C
AAA_19
DUF2800
DnaB_C
Dna2
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
BAQ27667
LinkDB
All DBs
Position
complement(2005509..2009573)
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AA seq
1354 aa
AA seq
DB search
MMDLDDLADVTLVAGAPRSGKTEFALRALIAAMRRYGDTQAVMTVSGRQIADDLGDRVIR
ELSAISQARPVTTLPAVAFRIVTAVRSRAGLPLPKLLNGAEQDMIIRRVLASHVDHTNRG
DECAVCDLLRTYFAVADWSGMVVDDSTDAFANQLRDMLARMNEIGAKPELEDGLIARAAS
KDGTLNERHERMRTQWRLAFALRAEYDEAIRAAYPGEYRLDASQLMVDAAATVTQAEIED
LPKLLIVDDFQDATLAGFDMLAALRGRGVRLLLVGNPDESVQTFRGSYPEYLFNAAQSRL
GARLERIDVTETEQRKPAYRTLAASRVSLSIASTEPTDEALPSRPGKMPALPGSLPIETV
PTGVSVDGISPDDGSIGTAMYRSAVEELDDVVWRIKTEHLQHSRDWNDMAVIAHDNDTVR
TFGERLRADGVPVRYSSVTRPLKDEPFVQGLFALIELAGLKKQTIAASKMGLRTAGAYIR
SRVALIMNSPLITVGGDAQHEGRPTRLATVESAMNALGSLAAVLESDDSGELDDSDRADV
AKQALLPRLIADWKDYVVDLRNSRQLTRMSDSADSATPTIAVDDSLMSEERLDSADLVDP
SDLPFGVDALYVLLLEGNTDRVLDAIASVLGADPQSKAFASLWKVLDKTIEAERKLISRE
PQYVLDCAWTACDKARIWQRVSLENSAAGRAANDRLDAAMRLFSYASGDESGGVLAAHTI
GAFIEQVRALTIEADSLAHTAPIDQAVTLTTPAGAAGRHWNLVFLPALQQGQWPNLAPRN
TLFGGESLADVMLHGELRDDIVTSAGRQDAQLAAVLASEQKSFLVALTRADERAVLSAVL
NDDNVPSDFLYGYLPERFDRERDADPEQRDYALVGGTGEFNGLDADPRGLVAAARSVLAD
EPAGSSKAKDAAAALALLASRGIAAADPAYWPFAKQSETDDSESRDSHRSDVVTLSPSAV
DRLWACPVCWMLENRFAGPRMGSVATNFGSLIHKVAQKATEAGLDLPQNHTALNDEENIE
NITQWMMAEYERLRGDLNAIPDPKERYEALGKDERAVDALRNIATYFVNSNRSGYPAKNA
DKFEVGKLTEAEPELQFAARFGFDDVLEAYNAIEGVDPIGRGELISLMGLLVGGWPETGM
SEWLTIRLSGRIDRLERRVLSGGGEQVRLIDYKTGKQLSGQDMFSDLQLACYQLGLAFPE
EGPRGAQAIALMPNIGQSALFHVMCSTAPAPRGTQGEEAYHQQALFANGSLNAGKYVPRF
CLPTFDKLFVDDLDGAERPEAVSDEHWRQFLELRSTMAVWSLTMIARVFYAAAACRAIRI
TARPTSKHVKSCRNKSVCPACAGEQNTVFERRVA
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atgatggatttggatgaccttgcggatgtgacgttggtcgcgggagcgccccgcagcggc
aaaaccgaatttgcgttacgtgcgctgatcgccgcgatgaggcggtatggcgatacgcag
gccgtgatgacggtatcgggccggcagatcgccgatgacttgggcgaccgggtgattcgt
gagttgtccgcgatttcgcaggcccgaccggtcaccacattgccggctgtggccttccgc
atcgtgacggccgtgcgctcgcgtgcgggtctgcctttgccgaagctgctcaacggcgcc
gaacaggacatgatcatccgtcgcgtgctcgcctcgcatgtggaccatacgaatcgtggt
gacgaatgtgccgtctgcgacctgctgcgcacgtatttcgcggtggccgactggtcgggc
atggtggtcgacgattccaccgacgcctttgccaaccagttgcgtgacatgctcgcccgc
atgaatgagatcggcgcaaaacccgaactcgaggatgggctgattgcacgtgccgccagt
aaggatggcacgctcaacgagcggcatgaacgcatgcgtacccaatggcgtctcgccttt
gcgttgcgtgccgaatacgatgaggcgattcgcgcggcctatccgggcgaataccgtctc
gacgcatcgcagctcatggtcgatgcggccgccaccgtgacgcaggccgagatcgaagat
ctgccgaagttactgatcgtcgacgatttccaagatgccacgcttgccggattcgacatg
ctcgcagctttgcgcgggcgcggcgtgcggctgctgctcgtcggcaatccggacgaatcc
gtacagacgttccgcggatcgtatccggaatacctgttcaacgcggcgcaatcgcgattg
ggggctcggctggaacgcatcgacgtcacggaaacggaacaacgtaagcccgcgtatcgt
acgctggccgcaagccgcgtgagtttgtcgatcgccagtaccgaaccgacggatgaggcg
ctgccgagtcgtccgggcaagatgccggcgctgccaggctcactacctatcgaaacggtg
ccgacgggtgtctccgtagacggtatttcgccagatgacggcagcatcggaaccgccatg
taccgctccgccgtcgaggagctggatgacgtggtctggaggatcaaaaccgagcatctg
caacattcccgcgactggaacgacatggctgtgatcgcgcacgacaacgacactgtgcgt
acgttcggcgaacgactgcgggccgacggcgtgcctgtgcgctattcgagcgtgacccgc
ccgctgaaggacgagccattcgtgcagggcctgttcgcactgatcgaactggccggactg
aagaagcagacgattgcggcgtcgaagatggggcttcgtacggccggcgcgtatattcgt
tcgcgcgtagcgctgatcatgaattcgccgctgatcacggtcggcggcgatgcacagcat
gaggggcgccccacacgattggcgaccgtcgaatcggcgatgaatgcgctcggctcgctt
gccgcggtattggaatcggatgattccggtgaattggacgattcggacagggccgacgta
gcgaagcaggcgttgttgccgcgtttgattgccgattggaaggattacgtcgtcgatttg
cgcaactcacgtcagttgacacggatgtccgattcggcggattcggccacaccgacgatt
gcggtagacgacagtctgatgtcggaggaacggcttgattccgcggacttggtcgatccg
tccgatcttccgtttggtgtggacgcgctgtatgtgctgctattggaaggcaatacggac
cgcgtgctcgacgcaatcgcctccgtactgggcgccgacccgcaatccaaagcatttgcg
agcctgtggaaagtgctcgacaagaccatcgaagcggaacgtaagctcatctcccgtgaa
ccgcaatacgtgcttgattgcgcgtggactgcctgcgacaaggcacggatctggcagcgc
gtatcgttggaaaattccgcggcaggccgtgcggcgaacgaccgtttggacgcggcgatg
cgcctgttcagctacgcatcgggcgacgaatcgggtggcgtgttggccgcacataccatc
ggcgcgttcatcgaacaggtgcgtgcgctcaccatcgaagccgattcgttggcgcacacc
gcaccgatcgaccaggccgtgacgctcaccacgccggcgggtgcggccggaaggcattgg
aaccttgtgttcctgccggccttgcaacagggccaatggccgaatctggctccccgcaac
accttgttcggcggagagagcctggcggatgtgatgctgcatggcgaactgcgcgacgac
atcgtcacttcggcgggccgccaggatgcgcagttggccgcggtgctcgcctccgagcag
aagagctttcttgtggcgttgacccgcgccgacgaacgcgcggtgctgagcgccgtattg
aatgacgacaatgtgccgtccgattttctgtacggctatctgccggaacgctttgaccgc
gaacgcgacgccgatccggaacagcgcgattatgcgttggtcggcggtaccggcgagttc
aatgggctcgatgccgatccgcgtggcttggtcgcggctgcgcgcagcgtgctggcggac
gaaccggccggctcgtccaaggcgaaggatgcggccgctgcgttggcgctgctggcttcg
cgtggcattgcggccgccgatccagcatattggccgttcgcgaagcagtcggagactgat
gattcggaatcccgggattcccatcgttccgatgtggtgacgttgtcgccatccgcggtg
gaccgcctgtgggcctgcccggtgtgctggatgctcgagaaccgcttcgcgggcccgcgc
atgggtagcgtggccacgaatttcggctcgctcatccacaaggtggcgcagaaggccacc
gaagcgggacttgatctgccgcaaaaccacactgcattgaacgacgaggagaacatcgag
aatatcacgcagtggatgatggccgaatacgaacggttgcgtggcgatctgaacgccata
cccgaccccaaggaacgttacgaggcactcggtaaggacgagcgggccgtcgacgcgcta
cgtaacatcgccacgtatttcgtcaactcgaaccgtagcggataccccgccaaaaatgcc
gataagttcgaagtcggcaagcttacggaggcggagccggaactgcagttcgccgcacgc
ttcggattcgatgacgttctcgaagcgtacaacgcgatcgagggcgtcgatccgatcggg
cgcggagagctcatatctctgatggggctgcttgtcggaggatggccggaaaccggcatg
agcgaatggcttacgatacgtctgtcggggcggatcgaccggctggaacgacgcgtgctg
agcggcggcggcgaacaggtgcgcctaatcgactacaagaccggtaaacagctcagcggc
caagacatgttcagcgatttgcaacttgcatgctaccaattgggattggcgtttccggaa
gaaggaccgcgcggcgcacaggccattgcactcatgccgaatatcgggcagagcgccctg
ttccacgtcatgtgttccaccgcgccggccccacgcggcacgcagggcgaggaggcatat
caccagcaggcgctgttcgccaacggaagcctgaatgcgggcaaatatgtgcccaggttc
tgcctccccacgttcgacaaactgttcgtcgacgatctcgacggtgctgaacgccccgaa
gcggtcagcgacgagcattggcggcagttcctggaactgcgctccacaatggcggtgtgg
tcgttgaccatgatcgctcgcgtcttctatgcggcggccgcctgtcgagccataagaatc
accgcacggccgacatcgaaacacgtgaagtcatgcagaaacaaatcagtctgcccggcc
tgtgccggcgaacagaacaccgtcttcgaaaggagagtggcatga
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