Betaproteobacteria bacterium UKL13-2: AEM42_03340
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Entry
AEM42_03340 CDS
T04342
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
beb
Betaproteobacteria bacterium UKL13-2
Brite
KEGG Orthology (KO) [BR:
beb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
beb03016
]
AEM42_03340
Enzymes [BR:
beb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
AEM42_03340
Transfer RNA biogenesis [BR:
beb03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
AEM42_03340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
AMS33560
UniProt:
A0A142LMW4
LinkDB
All DBs
Position
724083..725408
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AA seq
441 aa
AA seq
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MNEYDSDKMADVLEAAQGYTKTDKADEADLILLNTCSVREKASEKMFSDLGRLREFKDAK
PGVLIGVGGCVASQEGEALVKRAPYVDIVFGPQTLHRLPAMIQRRNATSLPQVDISFPEN
EKFDDMPPARVEGPTAFVSIMEGCSKYCSFCVVPYTRGEEISRSFADVMNEIRDLAARGV
KEVTLLGQNVNAYIGKLIDEESGEEIDADFALLLTAVNAIPNIERIRYTTSHPLEFTQRL
IDCYAKLPKLVSQLHLPVQSGSDTVLAAMKRGYTVMEYKSIIRRLREKRPGISISSDFIV
GFPGETEEDFNRSMKLIEDIRFDGAFSFVYSRRPGTPAASLMDETPQEIKLKRLQHMQRV
LEAQSTSVSEAMVGTVQRVLVEGVSRKDASELMARTDNNRVVNFPADKQLIGQFVDVVIT
KAMHFTLRGEVRTHEATLRVA
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagtacgactctgacaagatggcggatgtcttggaggccgctcagggctacacc
aagacggacaaggccgatgaagcggacttaatcctgttgaatacgtgctcggtacgcgag
aaggctagcgaaaagatgttttccgacttgggtcgtctccgcgagttcaaagacgcaaaa
ccaggtgtgttaatcggtgttggcggctgtgtcgcgtcacaagaaggcgaagcactggtc
aagcgtgcgccgtatgtcgatatcgtgttcggaccacagacattgcaccgtttgccggcg
atgatccaacggcgcaatgcgacatcgttaccgcaggtggatatatcatttcccgaaaac
gagaagtttgatgatatgccgccggcacgggtagaaggcccgacggcgtttgtgtcgatc
atggaaggttgctcgaagtactgtagtttttgtgtggtgccgtacacccgcggcgaagaa
atctcccggtcgtttgccgatgtgatgaatgagattcgcgatctagcggcaagaggcgta
aaggaagtgacgctgttggggcaaaacgtcaacgcctacattggtaaattgatcgacgag
gagagtggcgaagagatcgacgccgacttcgccttgttactcaccgctgtgaatgctatt
ccaaacattgaacgaatacgctataccacgtcacatccgcttgagttcacgcagcggttg
atcgattgttatgccaagctgcccaaactggtatcgcagttgcacctacccgtgcagtcg
ggcagtgataccgtgctggcggcaatgaagcgtggctacacggtcatggaatacaaatcc
atcattcgacgattgcgtgaaaaacgccctggcatatcgatctccagcgactttatcgtt
ggattcccgggtgagacagaggaagacttcaatcgcagcatgaagctcatcgaggatatt
cggtttgacggcgcattttcgtttgtgtactcgcgcagaccgggaacgccggcagcgagt
ttgatggatgaaacgccgcaggaaattaagctcaagcgcctgcagcacatgcagcgcgtg
ctggaggcgcagtcaacttccgtatcggaggccatggttggtaccgtgcagcgtgtgttg
gtggaaggggtatcgcgcaaagatgcgtcagaactcatggcgcgaactgacaacaatcgc
gttgttaactttccagcagacaagcagcttattgggcagtttgtcgatgttgttattacc
aaggcgatgcacttcacactgcgtggcgaggtgagaactcacgaagcgaccttgcgtgtc
gcttag
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