KEGG   Betaproteobacteria bacterium UKL13-2: AEM42_14965
Entry
AEM42_14965       CDS       T04342                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
beb  Betaproteobacteria bacterium UKL13-2
Pathway
beb03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:beb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    AEM42_14965
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:beb03021]
    AEM42_14965
   03400 DNA repair and recombination proteins [BR:beb03400]
    AEM42_14965
Enzymes [BR:beb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     AEM42_14965
Transcription machinery [BR:beb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     AEM42_14965
DNA repair and recombination proteins [BR:beb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      AEM42_14965
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD RNA_pol_L_2
Other DBs
NCBI-ProteinID: AMS33364
UniProt: A0A142LMB8
LinkDB
Position
complement(3301084..3302061)
AA seq 325 aa
MQSNAMTLLKPRIIDVENISPAHAKVVMEPFERGYGHTLGNALRRILLSSMPGYAPTEVK
ISGVLHEYSTIEGVQEDVVDILLNLKGLVLKLHNRTDTTLKLKKSTPGPVTGADIEQSHD
VEIVNPDHVIANLTAGGKIDMQIKVEKGRGYVAATAHRNDDNRTIGSILLDASYSPVRRV
SYAVESARVEQRTDLDRLVMDIETNGAIEPEEAVRYAARVLVEQLSVFADLQGTPMLAEE
AKSPQVDPLLLLPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEI
KEVLASKGLTLGMKLENWPTAGVMK
NT seq 978 nt   +upstreamnt  +downstreamnt
atgcaaagcaatgccatgactcttctgaagccgcgcatcatcgacgtcgaaaacatttct
cctgcccacgcaaaagtcgtgatggagccattcgagcgtggttatggtcacaccctaggc
aatgcgcttcgtcgcattttgttgtcgtcgatgccaggttacgcacccacggaagtgaag
atttccggtgtgttgcatgagtactccaccattgaaggcgtgcaagaagacgtcgtggat
attttgctcaacctgaaggggttggtgctgaagttgcacaatcgtaccgataccaccttg
aagctcaagaagtccacaccgggtccggtgactggcgcagacatcgaacagtctcacgat
gtcgaaatcgtcaatcctgatcatgtgatcgctaacctcacggctggcggcaagatcgat
atgcagatcaaggttgaaaaaggtcgcggctatgttgcggcaacggcgcatcgcaatgac
gataaccgtaccatcggctcaattctgttggacgcgtcctattcgccggtgcgccgtgtt
tcctacgcggtcgaaagcgcacgtgtcgagcagcgtaccgatcttgatcgtttggtgatg
gatattgagacaaacggcgcgatcgaaccggaagaggcggttcgctatgccgctcgtgtt
ctggttgagcagttgtcagtgtttgccgatcttcaaggcacaccgatgctggcagaagaa
gctaaatcgccgcaagttgatccacttctcttgttgccagtcgatgacctagagctgacg
gttcgttctgcaaattgcctcaaggccgagaacatttactacatcggtgatctgattcag
cgcaccgagaacgagctgctcaagacgcctaacttgggtcgtaagtcgctcaacgagatt
aaggaagtcctcgccagcaaagggctgacactcgggatgaagctagagaattggcccact
gccggtgtgatgaagtag

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