Priestia filamentosa: BEH_01935
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Entry
BEH_01935 CDS
T03983
Symbol
ligA
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
beo
Priestia filamentosa
Pathway
beo03030
DNA replication
beo03410
Base excision repair
beo03420
Nucleotide excision repair
beo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
beo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BEH_01935 (ligA)
03410 Base excision repair
BEH_01935 (ligA)
03420 Nucleotide excision repair
BEH_01935 (ligA)
03430 Mismatch repair
BEH_01935 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
beo03032
]
BEH_01935 (ligA)
03400 DNA repair and recombination proteins [BR:
beo03400
]
BEH_01935 (ligA)
Enzymes [BR:
beo01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BEH_01935 (ligA)
DNA replication proteins [BR:
beo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BEH_01935 (ligA)
DNA repair and recombination proteins [BR:
beo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BEH_01935 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BEH_01935 (ligA)
MMR (mismatch excision repair)
DNA ligase
BEH_01935 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BEH_01935 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
RNA_pol_A_CTD
HHH
Glycos_transf_3
Sas-5-like_implico
Motif
Other DBs
NCBI-ProteinID:
AKO90987
UniProt:
A0A1X7FX61
LinkDB
All DBs
Position
378286..380295
Genome browser
AA seq
669 aa
AA seq
DB search
MEFSQAKERVKELHNLLHQYSYEYHVLDKPSVPDSEYDRLLHELIGLEEEYEELKTPDSP
TVRVGGDPLSSFEKVEHKTPMLSLGNAFNEEDLADFDRRVRQGVGDNVSYVCELKIDGLA
VSLRYEGGAFAQGATRGDGTIGEDISNNLKTIRSIPLRASEPLSMEVRGEAYMPKKSFEK
LNEEKLERGEEPFANPRNAAAGSLRQLDSKLAAKRNLDIFVYSIADVGNTGITSHSEALD
KLEQLGFKTNPNRQKCDTIEEVYSYIKHWTEQRTELPYDIDGIVIKVDEFFQQEELGTTA
KSPRWAIAYKFPAEEVVTKLLDIELNVGRTGVITPTALLEPVQVAGTTVSRASLHNEDLI
REKDIRIGDNVVVKKAGDIIPEVVNVLEERRTGEEKEFTMPTHCPECESELVRLEGEVAL
RCLNPKCPAQIREGFIHFVSRNAMNIDGLGEKVVTQLFKEKLIEDVADLYQLQKEQLLEL
ERMGERSVTKLLQAIEASKGNSLERLLFGLGIRHVGAKAAKTLASVFHSMEGLQKATKEE
LLAIDEVGERMSDAVITYFEQPEVVELLEELRSYGVNMEYKGPKLVQAADSDSTFAAKTV
VLTGKLEILSRNEAKEKLEALGAKVTGSVSKKTDLLIAGEDAGSKLTKAEDLGIEVWSEQ
QFIEELKKQ
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggagttttcacaagcgaaagaacgcgttaaagagcttcataatcttttacatcaatac
agctatgaatatcatgtgttagacaagccgagcgttccagatagcgagtatgatcgttta
cttcatgaactcattgggcttgaagaagaatatgaagagttaaaaacaccggattcgcca
actgttcgcgttggcggagatccgctctcttcctttgaaaaagttgagcacaaaacacca
atgttaagcttaggaaatgcttttaacgaagaagatttggcggatttcgaccgccgtgtt
cgccaaggtgttggagataatgtttcatacgtttgtgaattaaagattgatggacttgct
gtttcacttcgttatgaaggcggagcatttgctcaaggagcaacgcgcggggacggaaca
attggagaagatattagcaataacttaaaaacgattcgttccatcccattaagagcaagt
gagcctctttcaatggaagtacgtggtgaggcttatatgccgaagaagtcatttgagaaa
cttaatgaagaaaagcttgagcggggtgaagagccttttgcaaacccaagaaatgcagct
gcaggctctcttcgtcagcttgattctaaattagcagcgaaacgaaacctcgatatattc
gtctattctatagcggacgttggaaatacaggtataacgtcccatagtgaggcgttagac
aagctagaacaattgggctttaagacgaatccaaatcgacagaaatgtgatacgatagaa
gaagtttacagctatattaaacattggacagaacaacggacagagcttccatatgatatc
gatggaatcgtcataaaagtggacgaattctttcagcaagaagagcttggcacaacagct
aaaagtccacgctgggctattgcctataagtttccggctgaggaagttgtgacaaagctg
ctcgatatcgagctaaatgtggggcgtacaggagttattacaccaactgcgctgttagaa
cctgttcaagtagcagggacaacggtaagccgtgcttcattacataacgaagacttaatt
cgtgagaaagatatccgaattggagacaatgttgtggtgaaaaaagcgggagatattatc
cctgaagttgtaaacgtacttgaagaacggcgtacaggagaggaaaaagagtttacaatg
ccaactcattgtcctgaatgtgaaagtgagcttgttcgtttagaaggagaagttgcgtta
agatgcttaaatccgaaatgtcctgcacaaattcgtgaggggtttatccactttgtatca
agaaatgcaatgaatattgatggtcttggagaaaaagtcgtaacacagctctttaaagag
aagcttattgaggacgtagcagatttatatcagctgcaaaaagaacagcttctagagctt
gagcgtatgggagagagatcggtcacaaagcttcttcaagcaattgaagcttcaaaggga
aattcacttgagcgcctcctttttggacttggtattcgtcatgttggagccaaagctgct
aaaacattagcaagcgtttttcattcaatggaaggcttacaaaaagcaacaaaagaggag
ctactggccattgatgaagtaggagagagaatgtctgacgccgttattacgtactttgag
cagcctgaagtagtcgagcttttagaagagctgcgctcgtacggagtgaatatggaatac
aaaggaccaaaacttgtacaagcagctgatagtgattcaacttttgcagccaaaacggtt
gtgcttacaggaaagcttgaaatattgtcacgcaatgaagcaaaagaaaagcttgaagca
cttggtgcaaaggtaacagggagcgtaagtaagaaaacggacttgcttatagctggagaa
gatgcaggatctaagcttacaaaagctgaagatttaggcatcgaagtatggagtgaacaa
cagtttattgaagagctcaaaaagcagtaa
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