KEGG   Brevibacillus formosus: BP422_13605Help
Entry
BP422_13605       CDS       T04939                                 

Definition
(GenBank) DNA polymerase domain-containing protein
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
bfm  Brevibacillus formosus
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:bfm00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    BP422_13605
Enzymes [BR:bfm01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BP422_13605
DNA repair and recombination proteins [BR:bfm03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     BP422_13605
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
3014498..3015400
Genome map
AA seq 300 aa AA seqDB search
MRPATKEYELTIDNHTLSITNPDKPLWPEAKVTKLDYLRYLLIVADPLLRYSKDRLLTVI
RYPHGIGDKHFYQKNAPDYAPEWIQTHTWENVRYVLCNDRATLVWMANQAALEWHVSFHL
AKDETPTELVFDLDPSTADFAVVIESALLLKQLLDELQLASWVKTSGSSGLQVYVPIELR
YTFEQTRQVGHFIASYLVSKHPSLLTIERLVKNRGDKLYIDYLQHWRGKTLPAPYSTRAK
EQATVSTPLLWEEVPHCHPTDFTVYTVPKRLETFGDLFSSVSAPTKRASLDTILGFLQSQ
NT seq 903 nt NT seq  +upstreamnt  +downstreamnt
ttgcgtcctgcaacaaaagagtacgagctgacgatcgacaatcacacattgtccatcaca
aaccctgacaagcctctatggccagaggccaaggtaaccaagctagattacttgcgctat
ttgctgattgtcgcagacccgctgctccgctatagcaaggatcgactcttaaccgtcatt
cgctatccgcacggaatcggtgataagcacttctatcaaaaaaacgcccctgactatgca
cccgaatggatacaaacgcatacgtgggaaaatgttcgttacgtactctgcaatgaccga
gcaacactcgtgtggatggcgaatcaagcggcgttggagtggcacgtctcctttcacctc
gccaaggatgagactccgacagagcttgtgtttgaccttgacccttccacagctgatttt
gccgttgtgatagagtctgccctcttgttgaaacaactgctcgatgaattacagctggct
tcatgggttaagacatctggttccagtggcttgcaagtctatgttccaatcgaactccgc
tatacgtttgaacagacgcgccaagtcggacatttcatcgcatcctatttagtcagcaag
catccctcacttttaaccatcgagcgcttagtgaagaatcggggggataagctgtacatt
gactatttgcaacactggcggggaaaaacattgccagccccttattcaacccgtgcaaag
gagcaggcaaccgtatcaacgccactcctgtgggaagaggttccccattgtcatcccaca
gacttcaccgtttatacggttcccaaacgtctggaaacattcggagatttattctcatcc
gtatctgctccgacaaaacgggcctcccttgataccatcctcggctttttgcaatcccag
taa

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