Paraburkholderia atlantica CCGE1002: BC1002_1242
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Entry
BC1002_1242 CDS
T01217
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
Organism
bge
Paraburkholderia atlantica CCGE1002
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ADG15326
UniProt:
D5W7D1
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Position
1:1385203..1386753
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AA seq
516 aa
AA seq
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MSPFTRPYGIAALFWALGLSGCMRVGPDFKPQHEAWSEHWSSASITQVTQQSAQPDARQW
WLIFGDQNLEGLIAAADANNGDLKIAGLRVLEARAQLGIALAGRYPQVQQVSADVLASAR
KRSGGANPRSGAFVQYGAGFAIGWELDFWGRFSRAIESADAAFFAAQANRDDALVLLHAQ
VADTYFTLRVAQARLRIARENAQLQKRSYDIAQKLFKAGESDELDFQQAKTQYLGTLSSI
PDLESQIVLARHALSVLIGRAPGPLPELDAQAGKEGVVPLVDHAVLQDVPADLLLRRPDV
RAAEYQMASQSALIGVAKADLYPSVSLLGTLTWTASSLAGAPSTLLFAAGPSVTWNVFDY
GRITNNVRVQDARLQELTVAYQNTVREAAREADDAATALIAALQRDTILNDAQGAARRSL
TLANTIYREGYSDFQRVLDAQRALFAQQDAYVVNRSNALGSVIALYKALGGGWETEQPLV
DAATRAQMRQRTDWGDLLDEATPSSGSPVQAEGMSR
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaccgttcacgcgtccgtacgggatcgcagcgcttttctgggcgctcggcctgagc
ggatgcatgcgggtgggaccggatttcaagccgcagcatgaagcgtggagcgagcactgg
agcagcgcatctatcacgcaggtcacgcagcaaagcgcacagcccgatgcgcgccaatgg
tggctgatcttcggcgaccagaatctcgaaggtctgatcgccgcagccgacgcgaacaac
ggcgacctgaagatcgccggactgcgcgtgctcgaggcacgcgcgcagctcggcatcgcg
cttgcgggacgctatccgcaggtgcagcaggttagtgccgatgtactcgcttcggcgcgc
aagcgctcggggggcgccaatccgcgctcgggtgcgttcgtgcagtatggcgcgggtttt
gccatcggctgggagctggatttctgggggcgtttcagccgcgcgatcgaatcggccgac
gccgcgttcttcgccgcgcaagcgaaccgcgacgatgcgctggttctgttgcacgcccag
gtcgcggatacctatttcacgctgcgggtcgcgcaggcgcggctacgtatcgcgcgcgag
aacgctcaattgcaaaagcgcagctacgacatcgctcaaaagctcttcaaggccggcgaa
tccgatgaactcgacttccagcaggcgaagacgcagtacctcgggacactgagcagcatc
cccgacctcgaaagccagatcgtgctggcgcgtcatgcgctgtcggtgctgatcgggcga
gcgccgggtccgctgccggaactcgacgcgcaggcgggcaaggaaggcgtggtgccgctg
gtggatcatgcggtgctgcaggacgtgccggccgatctgctgttgcgccgccccgacgtt
cgcgcggccgagtatcagatggcttcgcaatcggcgctgatcggcgtggccaaagcggat
ctgtacccgtcggtatcgctgctcggcacgctgacgtggaccgccagttcgctcgccggc
gcaccgagcacactgctctttgccgcgggcccgagcgtcacgtggaacgtgttcgattac
ggcaggatcacgaacaacgtgcgcgtccaggacgcgcggttgcaagagttgacggtcgct
tatcagaacacggtgcgcgaggcggcgcgcgaggccgacgatgccgcgaccgcgctgatc
gccgcgttgcagcgcgacaccattctgaatgacgcgcaaggcgccgcgcggcgctcgctg
acgctcgccaatacgatctatcgggaaggctattcggacttccagcgggtgctcgatgcg
cagcgcgcgctgttcgcccagcaggacgcgtacgtggtcaatcgcagcaatgcgctcggc
agtgtgatcgcgctctataaggcgctcggcggcggctgggagaccgaacagccgctcgtc
gacgcggcgacacgtgcgcagatgcggcaacgcacggattggggcgaccttctcgacgaa
gcgacgccgtcttccggttcgcctgtgcaggccgaagggatgtcacgatga
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