Paraburkholderia atlantica CCGE1002: BC1002_6872
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Entry
BC1002_6872 CDS
T01217
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
bge
Paraburkholderia atlantica CCGE1002
Pathway
bge01501
beta-Lactam resistance
bge01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BC1002_6872
01503 Cationic antimicrobial peptide (CAMP) resistance
BC1002_6872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bge03036
]
BC1002_6872
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bge02000
]
BC1002_6872
01504 Antimicrobial resistance genes [BR:
bge01504
]
BC1002_6872
Chromosome and associated proteins [BR:
bge03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
BC1002_6872
Transporters [BR:
bge02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
BC1002_6872
Antimicrobial resistance genes [BR:
bge01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
BC1002_6872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
ADG20678
UniProt:
D5WP55
LinkDB
All DBs
Position
pBC201:complement(105977..107128)
Genome browser
AA seq
383 aa
AA seq
DB search
MTTNKPTAKRMITMLICMGILLGALIGFNLYKAHMIRKFMAHNAVPAATVTSAVVSYQTW
QPQLAAVGSLRAVRGVDVTTEVAGLVREIAFKSGEEVKAGQVLVRLNDRSDRAQLASLRA
AADLSQTVYNRDTAQYDIQAIARAQVDADAADLRSKRAQVEQQAALVEKKTIRAPFAGRV
GITTVNPGQYVNPGDAIVTLQAIDPIYVDFHLPQQELGQLQVGQSVAVNTSAFVSRGFVG
KIRAINPRLDSTTRNVEVEAALDNREGKLLPGMYASVKVDVGHEQRYLTLPQTAITYNPY
GATVFVIKPGEHKDARGKTMPVAQQIFVTPGPTRGDQVAILKGLDEGALVVTSGQLKLKN
GTPLVIDNRVLPANSPAPTPQEQ
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaaataaaccaacagcgaaacggatgatcaccatgctgatctgcatgggcatt
ctgcttggcgcgctgatcggtttcaacctgtacaaggcgcatatgatccggaaattcatg
gcgcacaacgcggtgccggctgctaccgtcacgtccgccgtcgtgagctatcagacatgg
cagccacagcttgccgctgtgggcagcctgcgtgccgtgcgcggtgtcgacgtgacgacc
gaagtggctggactcgttcgcgagattgcattcaagtccggcgaggaagtcaaggccgga
caggtgctcgtgcgtctgaacgaccgctcggaccgcgcgcagctcgcctcgctaagagct
gccgccgacctatcgcaaaccgtctataaccgcgacacggcacagtacgacattcaggcg
atcgccagggcgcaagtcgatgctgatgccgccgacctgagaagcaaacgcgcacaagtc
gaacagcaggccgcactggttgagaaaaaaacgattcgcgcgcctttcgcgggacgcgtg
ggcatcacgacagtcaatccgggccagtacgtcaatccgggcgacgccattgttacgttg
caagctatcgatcccatctacgtcgactttcacctgccccagcaggaactcggtcaatta
caggtgggacagagcgtcgccgtaaatacaagtgcattcgtgagccgcggcttcgtgggc
aagatccgcgctatcaacccgcgcctcgacagcacgacgcgcaacgtggaggtcgaagcg
gccctcgacaaccgcgagggcaaactgttgccggggatgtacgctagcgtaaaagtcgat
gttggtcacgagcagcgctacctgacactgccgcaaacagcaatcacttacaatccctac
ggggcaacagttttcgtcatcaaaccgggcgaacataaggacgcacgcggcaaaaccatg
cccgttgcgcaacaaatcttcgtaacgccaggacccacgcgcggcgatcaggttgcgatc
ctgaagggcttagacgaaggcgcactagtggtaacgagcggccagctcaagctgaagaac
ggcacaccgctcgtaatcgacaatcgcgtgttgccggcaaacagtcctgctccgacgccc
caagaacaataa
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