KEGG   Burkholderia sp. CCGE1003: BC1003_1569Help
Entry
BC1003_1569       CDS       T01314                                 

Definition
(GenBank) DNA ligase D
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
bgf  Burkholderia sp. CCGE1003
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:bgf00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    BC1003_1569
Enzymes [BR:bgf01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BC1003_1569
DNA repair and recombination proteins [BR:bgf03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     BC1003_1569
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
JGI: 
UniProt: 
LinkDB All DBs
Position
1:1796833..1799757
Genome map
AA seq 974 aa AA seqDB search
MNDRLDLYNRKRRFDETPEPAGTRPAKKRGGRGAAHPEAAEGLSYVIQEHHARRLHYDFR
LELNGALLSWAVPKGPCLDPSVKRLAVHVEDHPVEYGSFEGEIPPGNYGAGTVIVWDRGT
WEPLGGPAEAARAYRAGKLKFHLHGEKLHGGWTLVRSHMRGNADKEQWLLIKEPDDEARD
ESEYDILAERPGSVLGGESAPAKAKGKAKGGSRAATGKSQMASVRGDPKRPDIVATRSNE
SLRELAASPAIEGAVKARLPAALKPQLATLVDATPPGDDWAYEIKFDGYRVLARIDASAK
GHGVQVFTRAGNDWTARFSRQVKAFGQLGLESAWLDGEAVVLDENGVPSFQALQNAFDSN
RPQDIVVYLFDVPFLNGYDLRGVPLQQRRAILRALLEPVDDSVLRFSNDFEFSADDLLKS
ACDMALEGIIGKRRDSGYVSGRSATWIKLKCRRRQEFVIGGYSEPSGSRAAFGALLLGVH
DSKGKLQYAGRVGTGFDAALLRSVKKELDAHETKRMPFASPPRERSRTPVHWVEPVLVAE
CNFAEWTSDGIVRQASFVSLRKDKPARQIVKEAPRKGDDVQQQTDIEADTAPKKRAARSK
GTGKTAAATADELAEGTAEKNARKPVEPAAKSAAKPAAKAAAKSGASAKRTATSDTDNDT
ENDTHAQSPASRSRKSASPAEVAGVRISHPDRVIDKSTGARKIDLVQYYESVARWMLPHL
ADRPVSLVRAPEDIGGELFFQKHTQKLSIPNITQHPGLDPGHPPLITVDSVKALVGAAQM
GTIEFHTWNGVASNIEKPDRVVFDLDPDPSLGWERMIEAALLTRTLLEELGLTSFCKTSG
GKGLHVVVPLAKHAGWDEVKGFSQAVAQHMASTLPKYFSAKMGAQNRKQKIFVDYLRNNR
GSSTVAAFSVRARPGLGVSVPLAWDEVAQTTGGDQWNIRNLHERLAQLKSDPWAEYPKTR
QRITAAMRKRLSGA
NT seq 2925 nt NT seq  +upstreamnt  +downstreamnt
atgaacgaccgactcgacctgtacaaccgcaagcgccgtttcgacgaaacgccggagccc
gcgggcacccgcccggcgaagaaacgcggcggccgtggcgcggcgcaccccgaggcggct
gagggactctcgtacgtgatccaggagcaccacgcgcggcgtctgcattacgacttccgg
ctcgaactgaacggcgcgctgctctcgtgggcggtgccgaagggtccgtgtctcgatccg
tcggtcaagcgccttgcggtgcatgtggaagaccatccggtcgaatacggcagcttcgaa
ggcgagattccgcctggcaattacggcgcgggcacagtgatcgtatgggaccgcggcacc
tgggagccgctcggcggaccagccgaggcggcgcgcgcctatcgcgccggcaagctcaag
tttcatttgcatggcgagaagctgcacggcggctggacgctcgtgcgcagccacatgcgc
ggcaacgcggacaaggagcagtggctcctcattaaggaacccgacgacgaggcgcgcgac
gaaagcgaatacgacattctcgctgaacggcccggcagcgtgctgggcggcgagtccgcg
cctgcgaaggcgaaggggaaggccaagggcggcagccgcgccgcaaccggaaaaagccag
atggcttcggtgcgtggcgacccgaagcgccctgacatcgtggcaacgcgcagcaacgag
tccctgcgcgaactcgccgcatcgccggctatagaaggggcggtgaaagcgcgcctgcct
gccgcgctcaagccgcaactggcgacgctcgtcgacgccacgccgcccggcgacgactgg
gcgtacgagatcaagttcgacggctatcgcgtgctcgcccgcatcgacgcgagtgcgaaa
ggccacggcgtgcaggtgttcacgcgcgcgggtaacgactggaccgccaggttcagccgg
caggtgaaagcgttcgggcagctgggactggagagcgcgtggctcgacggcgaagccgtg
gtgctcgacgagaacggcgtgccgagcttccaggcgctgcagaacgcgttcgactccaac
cggccgcaggacattgtcgtgtatctgttcgacgtgccgtttctgaacggctacgacttg
cgcggcgtgccgctgcaacagcgccgcgcgatcctgcgcgcgcttctcgaaccggtcgac
gacagcgtgctgagattttcgaacgatttcgaattcagcgccgacgacctgctgaaaagc
gcgtgcgacatggcgctcgaaggcatcatcggcaagcggcgcgacagcggctatgtgtcc
ggccgctcggcgacgtggatcaagctgaagtgccgccgccgtcaggagttcgtgattggc
ggctattcggaaccgtcgggcagccgcgcggcgttcggcgcgctgctattgggcgtgcac
gacagcaaaggcaagctgcagtatgcagggcgcgtcggcacaggattcgacgctgcgttg
ctgcgctcggtgaagaaggaactcgacgcgcatgagacgaagcgcatgccgttcgcgagc
ccgccgcgtgagcgcagtcgcacgccggtgcattgggtggagccggtgctggtcgccgaa
tgtaattttgccgaatggacgagcgacggcatcgtgcgccaggcgtcgttcgtgagtctg
cgcaaggacaagccggcgcgccagatcgtcaaggaagcaccacgaaaaggggacgacgtg
caacagcaaaccgatatcgaagccgacaccgcgccgaagaaacgtgcggcgcgcagcaag
gggacaggcaaaacggcagctgcgacagctgacgaactcgcggaaggaaccgctgaaaaa
aacgccaggaagccagttgaacccgcggctaagtccgcggctaaacccgcggcgaaagca
gcggcgaaatccggcgcatcggcgaagcggaccgccacgagcgacactgacaacgacact
gagaacgacacccacgcgcagtcccccgcgtcgcggtccagaaaatcggcgtcgcctgcg
gaagtcgccggggttcgcatatcgcatccggaccgcgtgatcgacaagagcaccggcgcg
cgcaagatcgacctcgtgcagtactacgaatcagttgcgcgatggatgttgcctcatctc
gccgaccggccagtgtcgctcgtgcgtgcgccggaggatatcggcggcgaactgtttttc
cagaagcacacacagaaactttcgatccccaacatcacgcagcatcccgggctcgatccg
gggcatcctccgctcatcacggtggatagcgtcaaggcgctggtcggcgcggcgcaaatg
ggcaccatcgaatttcacacgtggaacggcgtggcgtcgaatatcgaaaagcccgaccgc
gtcgtattcgatctggacccggacccgtcgcttggctgggagcgaatgatcgaggccgcg
ctgctgacacgcacgctgctcgaggaactcgggctcacgtcgttctgcaagacgagcggc
ggcaagggcctgcacgtcgtcgtgccgctcgcgaaacacgcgggctgggacgaagtgaag
gggttctcgcaggccgtcgcgcagcacatggcaagcacgttgcccaaatacttcagcgcg
aagatgggcgcgcagaatcgcaagcagaagatcttcgtcgactatctgcgcaataaccgc
ggctcgagcacggtcgcggcgttttcggtgcgggcgcggccggggctcggcgtttcggtg
ccgctcgcgtgggacgaagtcgcgcagaccacgggcggcgatcagtggaacatcaggaac
ctgcacgagcgcctcgcccaattgaagagtgacccgtgggccgagtatccgaagacgcgt
cagcgcattaccgcggccatgcgcaagcgcctgagcggcgcatag

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