Halalkalibacterium halodurans: BH0562
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Entry
BH0562 CDS
T00039
Symbol
groEL
Name
(GenBank) class I heat-shock protein (chaperonin)
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bha
Halalkalibacterium halodurans
Pathway
bha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BH0562 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bha03019
]
BH0562 (groEL)
03110 Chaperones and folding catalysts [BR:
bha03110
]
BH0562 (groEL)
03029 Mitochondrial biogenesis [BR:
bha03029
]
BH0562 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bha04147
]
BH0562 (groEL)
Enzymes [BR:
bha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
BH0562 (groEL)
Messenger RNA biogenesis [BR:
bha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BH0562 (groEL)
Chaperones and folding catalysts [BR:
bha03110
]
Heat shock proteins
HSP60 / Chaperonin
BH0562 (groEL)
Mitochondrial biogenesis [BR:
bha03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
BH0562 (groEL)
Exosome [BR:
bha04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
BH0562 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
BH0562 (groEL)
Exosomal proteins of breast cancer cells
BH0562 (groEL)
Exosomal proteins of colorectal cancer cells
BH0562 (groEL)
Exosomal proteins of bladder cancer cells
BH0562 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BAB04281
UniProt:
O50305
LinkDB
All DBs
Position
595136..596770
Genome browser
AA seq
544 aa
AA seq
DB search
MAKDIKFSEDARRSMLRGVDKLADAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIE
LEDAFENMGAKLVAEVASKTNDIAGDGTTTATVLAQAMIREGLKNVTSGANPMVIRKGIE
KATQVAVEELSKISKPIEGKDSIAQVAAISSADDEVGKIIAEAMERVGNDGVITIEESKG
FSTELEVVEGMQFDRGYASPYMVTDSDKMEAVLDNPYVLITDKKISNIQEVLPVLEQVVQ
QGKPILIIAEDVEGEALATLVVNKLRGTFNAVAVKAPGFGDRRKAMLEDIAILTGGEVIT
EDLGLDLKSANITQLGRASKVVVTKENTTIVEGAGESDKIAARVNQIKAQIEETTSDFDK
EKLQERLAKLAGGVAVLKVGAATETEMKERKLRIEDALNSTRAAVEEGIVAGGGTALVNV
IKAVSSIGAEGDEATGVNIVLRALEEPVRQIAHNAGLEGSVIVERLKKEEAGFGFNAATG
EWVNMVEAGIVDPTKVTRSALQHAASVSAMFLTTEAVIADKPEENEGGGGMPDMGGMGGM
GGMM
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatattaagtttagcgaagacgcacgtcgctctatgcttcgtggtgtagat
aaacttgctgacgcagtaaaagtaacgctaggaccaaaaggtcgtaacgtcgttcttgaa
aagaaattcggttctccacttattacaaatgacggtgtaaccatcgcaaaggaaatcgaa
ttagaagatgcgtttgaaaacatgggtgcaaagcttgttgcagaagtggcaagcaagaca
aatgacattgctggggacggtacaacaacagcaacggtccttgcacaagcgatgattcgc
gaaggcttgaaaaacgtcacgtctggcgcgaacccaatggtgattcgtaaaggaatcgaa
aaagcgactcaagtagccgttgaagaactttctaaaatctctaagccaatcgaaggcaaa
gattcaatcgctcaagttgcggcgatttcttctgctgacgatgaagtagggaaaatcatt
gctgaagcaatggagcgcgtaggcaacgacggcgttattacgattgaagagtctaaagga
ttctctacagagctagaagtggttgaaggtatgcaatttgaccgcggctatgcgtctcct
tacatggtgacagactctgacaagatggaagcggttcttgacaacccttatgtcttgatc
acagataagaagatttctaacatccaagaagtattaccagttcttgagcaagttgtacaa
caaggcaagccaatccttatcattgctgaggatgtagaaggtgaagctcttgcaacactt
gtggtgaacaaacttcgtggaacatttaacgcagtagcggttaaagctcctggattcggt
gatcgtcgtaaagcaatgcttgaagacattgcgatccttactggcggtgaagtgatcaca
gaagacctagggcttgacttgaaatctgcgaacatcacacagcttggtcgcgcaagtaaa
gtcgttgtaacgaaagagaacacaacgattgttgaaggtgctggcgaaagcgataaaatc
gcagctcgcgttaatcaaatcaaagcacaaatcgaagaaacaacatctgacttcgataaa
gaaaaacttcaagagcgcttagcgaagcttgctggtggcgtcgctgttcttaaagtcggt
gcagctactgaaactgaaatgaaagagcgcaaacttcgcattgaagacgcgttgaactct
actcgcgcggctgtagaagaaggaatcgttgctggtggtggtactgcccttgtgaacgtg
attaaagcagtctctagcatcggtgcagaaggtgacgaagcaacaggtgtgaacatcgtt
cttcgtgcccttgaagagccagttcgtcaaattgctcacaacgcaggtcttgaaggctct
gtgatcgtcgagcgcctcaagaaagaagaagctggcttcggtttcaacgcagcaactggt
gaatgggtgaacatggttgaagctggtatcgttgacccaacgaaagtaactcgttcagcg
cttcagcacgcagcatctgtatccgctatgttcctcacaacagaagcggtgatcgctgat
aagcctgaggagaacgagggcggcggcggaatgcctgacatgggcggaatgggtggcatg
ggcggcatgatgtaa
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