Bradyrhizobium icense: LMTR13_22785
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Entry
LMTR13_22785 CDS
T04485
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
bic
Bradyrhizobium icense
Pathway
bic03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LMTR13_22785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bic03400
]
LMTR13_22785
Enzymes [BR:
bic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LMTR13_22785
DNA repair and recombination proteins [BR:
bic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LMTR13_22785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ANW02570
UniProt:
A0A1B1UIK3
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All DBs
Position
4805251..4806021
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AA seq
256 aa
AA seq
DB search
MKIATFNINNINRRLPNLLRWLRAAKPDVVALQELKSTDAEFPILAIEKAGYGAVWRGQR
TWNGVAILARNAEPVLTRTALPGDRNDEEARYIEAAVNGIIVTSIYLPNGNPQPGPKFDY
KLDWFKRLRSHAAKLLKQDIPVVLAGDYNVAPTEFDIYPTKSWDNDALIQPKSRAAFKAL
ADQGWTDAIRTLHPSKPMFTFWDYKRNRWPRDAGLRLDHLLLSPAIAPRLIKADVDRKVR
GEEGASDHAPAWIVLR
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgcgaccttcaacattaacaatatcaaccgtcgcctgccgaacctgttgcgc
tggctgcgcgcggccaagcccgacgtcgttgccttgcaggaactgaaatcgaccgacgcg
gaatttccgattctggcaatcgagaaagccggctacggcgcggtgtggcggggacagaga
acttggaacggcgttgccattctggcgcgcaacgccgagccggtattgacccgcaccgcg
ctgcccggtgatcgcaatgatgaagaggcgcgctatatcgaagcagccgtcaacggcatc
atcgtcaccagcatctatctgccgaacggcaatccgcagccgggaccgaaattcgactac
aagctcgactggttcaaacggctgcggtctcacgccgcaaaactgctcaagcaggatatc
cccgtggtactggctggcgattacaacgtcgcgccgaccgagttcgatatctatccgaca
aagtcctgggacaacgacgcgctgatccagccgaagagccgcgccgcattcaaggcgctg
gcggaccagggctggacagatgcgatccggacgcttcatccatccaaaccgatgttcacg
ttctgggattacaagcgcaaccgctggccgcgcgacgccggattacggcttgatcatctg
ctgctgagcccggcgatagcgccgcgcctgatcaaggccgacgtcgatcgcaaggtacgc
ggcgaggaaggcgccagcgaccacgcgccggcgtggatcgtgctgcgctaa
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