Beijerinckia indica: Bind_0141
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Entry
Bind_0141 CDS
T00688
Name
(GenBank) Peptidoglycan-binding domain 1 protein
KO
K21470
L,D-transpeptidase YcbB
Organism
bid
Beijerinckia indica
Brite
KEGG Orthology (KO) [BR:
bid00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bid01002
]
Bind_0141
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bid01011
]
Bind_0141
Peptidases and inhibitors [BR:
bid01002
]
Cysteine peptidases
Family C82
Bind_0141
Peptidoglycan biosynthesis and degradation proteins [BR:
bid01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Bind_0141
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ACB93799
UniProt:
B2IBS7
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All DBs
Position
complement(170001..171875)
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AA seq
624 aa
AA seq
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MRSPGKSRGPAASRPSRLALLMIAGLGMPGGLSDAFAETLAPSKTPAAKIPLAKIPLTER
PFIKTQFAKTDADEADTLRSVRAPSPLPASSTPPTVQSEDSVKPDSATDKKPETAMAPAI
PASALQKLIEDRAERPVTGPHITEQRREREAIAAFYAARDFALLWFTDGHPNRAARSLLP
RLAAAAEDGLDLGPRLPALPPDNASADSNLDETRQAALDLALSEAVVAYGRQASGSRIDP
HEIGKLIGARPEIADPSLILASVAAAGPEAGTILRGFNPQQEGYVALRDKLVAMRQERQP
VARRLIPSGPPLRVGMRDPRVALIRARLSLDGKLDKGQTENGASEIYDSEVSMAVADFQR
ANGLPASGVLTPQTSAILSGARLSATPLSPHVEHEILANMERWRWMPHDLGHDRIEVNLP
DFEVAVIEKDEVVSRHRVVIGKEETPTPIFSHVMQFLIVNPYWNVPASILKKEMLPKLAA
NPNYLHRLGYEVFKRDGHLVVRQPPGERNALGRIKFMFPNDYAVYLHDTPSKHYFEEDKR
AFSHGCVRVDEPYHFAEAVLGPKWSESRIKGLFGEKERYITLPKPLPIHLEYFTATVDRF
GHLHLSEDVYGYSQKVRIALGLQD
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcgcctgggaagagccggggtcccgccgcgtcgcggccctctcgcctcgccttg
ttgatgatcgcggggctcggcatgccgggcggattgtccgacgctttcgccgaaactctt
gcgcccagcaaaacgccagcagccaaaattccactggccaaaattccgctgaccgagcgg
cctttcatcaaaacccagtttgccaagacagatgccgacgaggccgacacactccggtcg
gtccgcgcgccctctcccctgccggcttcgtccacgcccccgacggtccagtccgaagat
tccgtcaaaccggacagtgccacggacaaaaagccggaaacagccatggcgccagccatt
ccggcgagcgcgttgcaaaagctgatcgaggaccgtgccgagcgccctgtcactggcccc
cacatcactgaacaaagacgtgagcgcgaggcgatcgcggccttctacgcggcgcgcgat
ttcgcactgctttggtttacagatggccatcccaatcgcgccgcgagaagcctgttgccg
cgtcttgcggcggcggctgaagatggccttgatctcggcccgcgtcttcccgctttgccc
ccggacaatgcgagtgccgattcaaacctcgatgaaacgcggcaggcggcgctcgatctt
gccctatccgaggccgtcgtcgcctatggccggcaagcaagcggcagtcggatcgatcca
cacgagatcggcaagctgatcggcgcgcggccagagattgccgacccctccctgattctc
gccagcgtcgcggcagcaggccccgaggccggtacgatcctgcgcggttttaatccgcag
caggaaggctatgtcgccttgcgcgacaaactcgtcgccatgcggcaagaacgccagccg
gttgctcggcggctcattccctccggcccgcctctgcgcgtcggtatgcgggatccgcgc
gtcgctttgatccgggcgcggttgagcctcgatggcaaactcgacaagggtcaaacggaa
aacggcgcgtccgaaatctatgactccgaagtctccatggccgtcgccgattttcagcgg
gccaatggcctgcccgcttctggtgttctcaccccgcaaaccagcgccattctctcgggt
gcgcggctatcggccacccctttatcgccgcatgtcgaacatgaaattcttgccaatatg
gagcgctggcgctggatgccgcacgatctcggccacgatcggatcgaggtgaacctgcct
gatttcgaggtcgccgtcatcgagaaggacgaggtggtgagccgtcaccgtgtcgtcatc
ggcaaggaagaaacgccgacgccgatcttttcccatgtgatgcaatttctgatcgtcaat
ccctattggaacgtgccggcctcgatcctcaaaaaggaaatgctgccgaaactcgcggcc
aatccgaattatctgcatcgcctcggctatgaagtcttcaaaagggatgggcatctcgtc
gtgcgccagccgcccggcgaacgcaatgcgctcggccgcatcaaattcatgttccccaat
gattatgcggtctatctccacgatacgccatccaagcattatttcgaagaagacaagcgc
gccttcagccacggttgcgtgcgggtcgacgagccctatcattttgccgaagcggtcctt
ggaccgaaatggagtgaaagccgcatcaaaggcctgttcggggagaaggaacgctatatc
accctgccgaagcccctgcccattcatctggaatatttcaccgccaccgtcgatcggttc
ggacatctccatttgagtgaggatgtctatggctattcgcagaaggtgagaatagcgctc
ggccttcaagactaa
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