Beijerinckia indica: Bind_2028
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Entry
Bind_2028 CDS
T00688
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bid
Beijerinckia indica
Pathway
bid03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Bind_2028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bid03400
]
Bind_2028
Enzymes [BR:
bid01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Bind_2028
DNA repair and recombination proteins [BR:
bid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Bind_2028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ACB95650
UniProt:
B2IF85
LinkDB
All DBs
Position
2318622..2319494
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AA seq
290 aa
AA seq
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MSDSLTALLRWYAAMGVDIALDEAPHDRFAESAAMASRRAPSVPQDDRQARADHPPPSSV
SPSRQQAPAPRQLPGFAQEALSQEALSQNAEEAAASAKTLDELREKLDAFQGCGLKNTAT
QLVFADGNPNSSVMIIGEAPGADEDRQGRPFVGRAGQLLDRMLAAVDLDRTQVYIANIVP
WRPPGNRTPTPLEIAACLPFIRRQIELVSPRFIVCLGAPSAQTLLGTKEAITRLRGRWRD
WSCGGKTIHVLPMLHPAYLLRQPAEKKRAWADWRLLAKALRDDSPQTLKD
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattccctcaccgctcttttgcgctggtatgcggcgatgggcgtcgatatcgct
ctcgacgaagcaccacacgaccggttcgcggaatccgccgccatggccagccggcgagcc
ccctccgtcccccaagacgaccggcaggcgcgggcagatcatccaccaccatccagcgtc
tcgccatctcggcaacaggcccccgctcctcggcagctcccaggcttcgcgcaagaggct
ctctcccaagaggctctgtcccaaaatgccgaggaagccgccgcttcggccaagacactc
gatgaattgcgcgagaaactcgatgcctttcaaggttgcggcctgaaaaacacggcgaca
caactcgtcttcgccgatggcaatccaaacagttccgtcatgatcatcggcgaggcgcct
ggtgccgacgaggaccgccagggccgcccctttgtcggccgcgccgggcaattgctcgat
cgcatgctggcagccgtggatctcgaccgcacccaggtctatatcgccaatatcgtgccc
tggcgcccgccgggcaatcgcacgccgaccccgctcgaaatcgcggcctgcctgcccttc
atccgccgtcagatcgaattggtttcgccacgtttcattgtctgcctcggcgcgccctcc
gcacaaacgctcctcggcaccaaggaggccatcacccggctgcgcggccgctggcgcgat
tggtcctgcggcggcaagaccattcacgtcctgccgatgctgcatccagcctatctgctg
cgtcagccggcggagaaaaaacgcgcatgggcggattggcgcctactcgccaaggcgctt
cgcgatgacagtccacagactctgaaggattaa
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