KEGG   Bacillus infantis: N288_00705
Entry
N288_00705        CDS       T02860                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
bif  Bacillus infantis
Pathway
bif03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bif00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    N288_00705
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bif03021]
    N288_00705
   03400 DNA repair and recombination proteins [BR:bif03400]
    N288_00705
Enzymes [BR:bif01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     N288_00705
Transcription machinery [BR:bif03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     N288_00705
DNA repair and recombination proteins [BR:bif03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      N288_00705
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1
Other DBs
NCBI-ProteinID: AGX02158
UniProt: U5L4P3
LinkDB
Position
128385..131804
AA seq 1139 aa
MFQDISPIEDFTGNLSLEFIDYSLGDPKYSVEESKERDVTYSAPLRVKVRLVNKETGEVK
DQDVFMGDFPLMTETGTFVINGAERVIVSQLVRSPSVYYSGKLDKNGKRGFSATVIPNRG
AWLEYETDAKDVVYVRIDRTRKLPVTVLLRALGFGSDQEIIDLIGDNEYIRNTLEKDNTE
STDKALLEIYERLRPGEPPTVENAKSLLVSRFFDPKRYDLANVGRYKINKKLHIKNRLFN
QRLAETLVDPETGEIIAEKGTMLDRRNLDRIIPNLENNIGFRTAAPSGGVVEDEVLLQSI
KVYAPNEDGEKEINIIGNAYVEEAVKNIAPSDIIASIGYFFNLLHGVGDTDDIDHLGNRR
LRSVGELLQNQFRIGLSRMERVVRERMSIQDTNTITPQQLINIRPVIASIKEFFGSSQLS
QFMDQTNPLAELTHKRRLSALGPGGLTRERAGFEVRDVHYSHYGRMCPIETPEGPNIGLI
NSLSSFAKVNRFGFIETPYRRINPETGRVTDQIDYLTADEEDNYVVAQANARLGDDGTFL
DDEVVARFRGENTVVPKDRVDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAV
PLLQPEAPRVGTGMEYVSGKDSGAAVICKHEGIVEHVEAREVWVRRISEVNGQEVKGDLD
KYRMLKFIRSNQGTCYNQRPIVAVGNRVTKGEILADGPSMELGELALGRNVLVAFMTWDG
YNYEDAIIMSERLVKDDVYTSIHIEEYESESRDTKLGPEEITRDIPNVGEDALRNLDERG
IIRTGAEVKDGDLLVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVL
DVKVFNREDGDELPPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVISRILPEEDMPYLP
DGTPVDIMLNPLGVPSRMNIGQVLELHLGMAARALGIHVASPVFDGAREEDVWSTIEEAG
MARDAKTVLYDGRSGEPFDNRVSVGVMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKA
QFGGQRFGEMEVWALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGENVPEPGVPESF
RVLMKELQSLGMDVKILSGDEKEIEMRDLEDDDDVQQAESLTIAPDTEEANTEKVASKE
NT seq 3420 nt   +upstreamnt  +downstreamnt
atgttccaggacatttcgccaattgaagactttactggtaacttatcgcttgaatttatt
gattacagccttggcgatccaaagtattccgttgaggaatcgaaagaacgagatgttaca
tattcagcacctttgcgtgttaaagtgcgtcttgtaaacaaagaaacaggcgaagttaaa
gaccaggatgtctttatgggtgacttcccgcttatgacagaaacaggtacgtttgtgatc
aatggagcagaacgcgtcatcgtttctcagttagtacgttcaccgagtgtatactatagc
ggaaagctggataaaaacgggaaaagaggcttctctgctactgttatcccgaaccgcggc
gcctggcttgaatatgaaacagatgccaaggatgtcgtatacgttagaatagatcgtact
cggaaactgcccgttacggttcttttgcgtgcacttgggttcggctctgatcaagaaatc
attgatttgatcggagacaatgaatatatccgcaatacgcttgaaaaagacaacacagaa
agtacagataaagcccttctggaaatctatgagcgtcttcgtccgggcgagccgccgact
gtagaaaatgcaaaaagcctgctcgtttccagattctttgatccaaaacgctatgattta
gcgaatgttggacgctacaagatcaataagaagcttcatattaaaaatagactgttcaat
cagcgccttgctgagactctggttgatcctgaaacaggcgaaatcatcgctgagaaaggg
actatgctggaccgccgcaacctggaccgcatcatccctaatcttgagaacaatatcggc
ttcaggacagcagctccttcaggaggagtggtggaggacgaggtccttcttcaatccatc
aaggtgtatgcccctaatgaagacggagaaaaagagatcaatatcatcggcaatgcctat
gtcgaggaagcggtcaagaatatcgcgccttctgatatcattgcgtccattggctatttc
ttcaaccttcttcatggagtcggcgataccgatgatatcgaccacctggggaacagacgt
cttcgttcagtaggcgaactgctccagaaccagttccgaatcggactttccaggatggaa
cgtgttgtccgcgagaggatgtccatccaggatacaaatacaattacaccgcagcagctg
atcaacatcaggcctgtgatcgcttctatcaaagagttctttggcagctcacagctttca
cagttcatggaccagacaaacccgcttgccgagctgacgcataagcgccgtctatctgca
ttggggcctggcggtctgactcgtgagcgcgccggctttgaagtccgtgacgttcactat
tcacactatggccgcatgtgtccgattgaaacgccggaaggaccgaatattggtctgatc
aactcactgtcatcctttgcgaaggtaaaccgcttcggattcatcgaaacgccttaccgc
cgcatcaaccctgagacaggcagagtgacagaccagatcgattacctgacagctgatgaa
gaagataactatgttgttgcacaggcgaatgcgcgtcttggcgatgacggtactttcctt
gacgatgaagtcgttgcgcgtttccgcggggaaaatacagttgtgccgaaagaccgcgtc
gactatatggatgtttctcctaaacaggtagtatcagctgcaacagcttgtattcctttc
cttgaaaacgatgactccaaccgtgccctcatgggggcgaacatgcagcgtcaggctgtg
ccattgctgcagcctgaagcacctcgtgtaggtacaggaatggagtatgtttccggaaaa
gactccggtgcggctgtcatctgcaagcacgaaggaatcgtcgagcatgttgaagctcgt
gaagtctgggtgcgccgcatttccgaggtcaatggccaggaagtcaaaggcgaccttgat
aaatacaggatgctgaaattcatccgttccaaccagggaacatgctataaccagcgtccg
attgttgctgtcgggaaccgtgtgacaaaaggcgagatccttgccgacggcccttccatg
gagcttggcgagcttgcgctgggccgcaatgtgcttgttgccttcatgacttgggacggc
tataactatgaggatgcgatcatcatgagcgaacgccttgtaaaagacgacgtttataca
tccatccacattgaagaatatgaatcagaatcaagagatacaaagctagggcctgaagaa
atcacccgcgacatcccgaatgtcggtgaagatgcactccgcaatcttgatgagcgcgga
atcatccgtacgggtgctgaagtaaaggatggcgacctgcttgtcggtaaggttactcct
aagggtgtaacagagctgacagcagaagaacgcctcctgcatgccatctttggcgagaaa
gcccgtgaagtgcgtgatacttcccttcgtgttcctcacggaggaggcggaatcgtgctt
gatgtcaaagtcttcaaccgtgaagacggagatgagctgccgccaggcgtgaaccagctt
gtacgtgtttatatcgttcagaagcgtaaaatctccgagggagataaaatggcaggacgc
cacggaaataaaggggttatctcccggatccttccggaagaagatatgccttaccttcca
gatggcacaccagtcgacatcatgttgaatccgctgggggttccttcccgtatgaacatc
gggcaggtgcttgagcttcacctcggcatggctgcgagagcgctgggcattcacgttgct
tcaccggtatttgatggagcgcgcgaggaagatgtctggtcaacaattgaagaagccggc
atggcccgtgatgcgaagacagtcctgtacgacggccgttcgggagaaccgttcgacaac
cgtgtatctgtcggcgtcatgtacatgatcaaactggcccacatggttgatgataagctc
catgcccgttcaaccggcccttactcacttgttacgcagcagcctcttggcggtaaagcc
cagttcggcggacagcgtttcggggagatggaggtttgggcgcttgaagcttacggtgcc
gcctatacattgcaggaaatcctgacagttaaatcagatgacgtagtcggacgtgtgaaa
acgtacgaagcgattgtcaaaggcgagaatgtacctgagccgggagtgccggagtccttc
cgcgtattgatgaaagagcttcagagcttgggtatggatgttaagatcctgtcaggcgat
gagaaagaaattgaaatgcgcgaccttgaggacgatgatgatgtacagcaggctgaatcg
ctgaccatcgcgccggatacagaggaagcaaacactgaaaaagtagctagcaaagaataa

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