Bacillus infantis: N288_00705
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Entry
N288_00705 CDS
T02860
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bif
Bacillus infantis
Pathway
bif03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bif00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
N288_00705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bif03021
]
N288_00705
03400 DNA repair and recombination proteins [BR:
bif03400
]
N288_00705
Enzymes [BR:
bif01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
N288_00705
Transcription machinery [BR:
bif03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
N288_00705
DNA repair and recombination proteins [BR:
bif03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
N288_00705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AGX02158
UniProt:
U5L4P3
LinkDB
All DBs
Position
128385..131804
Genome browser
AA seq
1139 aa
AA seq
DB search
MFQDISPIEDFTGNLSLEFIDYSLGDPKYSVEESKERDVTYSAPLRVKVRLVNKETGEVK
DQDVFMGDFPLMTETGTFVINGAERVIVSQLVRSPSVYYSGKLDKNGKRGFSATVIPNRG
AWLEYETDAKDVVYVRIDRTRKLPVTVLLRALGFGSDQEIIDLIGDNEYIRNTLEKDNTE
STDKALLEIYERLRPGEPPTVENAKSLLVSRFFDPKRYDLANVGRYKINKKLHIKNRLFN
QRLAETLVDPETGEIIAEKGTMLDRRNLDRIIPNLENNIGFRTAAPSGGVVEDEVLLQSI
KVYAPNEDGEKEINIIGNAYVEEAVKNIAPSDIIASIGYFFNLLHGVGDTDDIDHLGNRR
LRSVGELLQNQFRIGLSRMERVVRERMSIQDTNTITPQQLINIRPVIASIKEFFGSSQLS
QFMDQTNPLAELTHKRRLSALGPGGLTRERAGFEVRDVHYSHYGRMCPIETPEGPNIGLI
NSLSSFAKVNRFGFIETPYRRINPETGRVTDQIDYLTADEEDNYVVAQANARLGDDGTFL
DDEVVARFRGENTVVPKDRVDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAV
PLLQPEAPRVGTGMEYVSGKDSGAAVICKHEGIVEHVEAREVWVRRISEVNGQEVKGDLD
KYRMLKFIRSNQGTCYNQRPIVAVGNRVTKGEILADGPSMELGELALGRNVLVAFMTWDG
YNYEDAIIMSERLVKDDVYTSIHIEEYESESRDTKLGPEEITRDIPNVGEDALRNLDERG
IIRTGAEVKDGDLLVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVL
DVKVFNREDGDELPPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVISRILPEEDMPYLP
DGTPVDIMLNPLGVPSRMNIGQVLELHLGMAARALGIHVASPVFDGAREEDVWSTIEEAG
MARDAKTVLYDGRSGEPFDNRVSVGVMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKA
QFGGQRFGEMEVWALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGENVPEPGVPESF
RVLMKELQSLGMDVKILSGDEKEIEMRDLEDDDDVQQAESLTIAPDTEEANTEKVASKE
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgttccaggacatttcgccaattgaagactttactggtaacttatcgcttgaatttatt
gattacagccttggcgatccaaagtattccgttgaggaatcgaaagaacgagatgttaca
tattcagcacctttgcgtgttaaagtgcgtcttgtaaacaaagaaacaggcgaagttaaa
gaccaggatgtctttatgggtgacttcccgcttatgacagaaacaggtacgtttgtgatc
aatggagcagaacgcgtcatcgtttctcagttagtacgttcaccgagtgtatactatagc
ggaaagctggataaaaacgggaaaagaggcttctctgctactgttatcccgaaccgcggc
gcctggcttgaatatgaaacagatgccaaggatgtcgtatacgttagaatagatcgtact
cggaaactgcccgttacggttcttttgcgtgcacttgggttcggctctgatcaagaaatc
attgatttgatcggagacaatgaatatatccgcaatacgcttgaaaaagacaacacagaa
agtacagataaagcccttctggaaatctatgagcgtcttcgtccgggcgagccgccgact
gtagaaaatgcaaaaagcctgctcgtttccagattctttgatccaaaacgctatgattta
gcgaatgttggacgctacaagatcaataagaagcttcatattaaaaatagactgttcaat
cagcgccttgctgagactctggttgatcctgaaacaggcgaaatcatcgctgagaaaggg
actatgctggaccgccgcaacctggaccgcatcatccctaatcttgagaacaatatcggc
ttcaggacagcagctccttcaggaggagtggtggaggacgaggtccttcttcaatccatc
aaggtgtatgcccctaatgaagacggagaaaaagagatcaatatcatcggcaatgcctat
gtcgaggaagcggtcaagaatatcgcgccttctgatatcattgcgtccattggctatttc
ttcaaccttcttcatggagtcggcgataccgatgatatcgaccacctggggaacagacgt
cttcgttcagtaggcgaactgctccagaaccagttccgaatcggactttccaggatggaa
cgtgttgtccgcgagaggatgtccatccaggatacaaatacaattacaccgcagcagctg
atcaacatcaggcctgtgatcgcttctatcaaagagttctttggcagctcacagctttca
cagttcatggaccagacaaacccgcttgccgagctgacgcataagcgccgtctatctgca
ttggggcctggcggtctgactcgtgagcgcgccggctttgaagtccgtgacgttcactat
tcacactatggccgcatgtgtccgattgaaacgccggaaggaccgaatattggtctgatc
aactcactgtcatcctttgcgaaggtaaaccgcttcggattcatcgaaacgccttaccgc
cgcatcaaccctgagacaggcagagtgacagaccagatcgattacctgacagctgatgaa
gaagataactatgttgttgcacaggcgaatgcgcgtcttggcgatgacggtactttcctt
gacgatgaagtcgttgcgcgtttccgcggggaaaatacagttgtgccgaaagaccgcgtc
gactatatggatgtttctcctaaacaggtagtatcagctgcaacagcttgtattcctttc
cttgaaaacgatgactccaaccgtgccctcatgggggcgaacatgcagcgtcaggctgtg
ccattgctgcagcctgaagcacctcgtgtaggtacaggaatggagtatgtttccggaaaa
gactccggtgcggctgtcatctgcaagcacgaaggaatcgtcgagcatgttgaagctcgt
gaagtctgggtgcgccgcatttccgaggtcaatggccaggaagtcaaaggcgaccttgat
aaatacaggatgctgaaattcatccgttccaaccagggaacatgctataaccagcgtccg
attgttgctgtcgggaaccgtgtgacaaaaggcgagatccttgccgacggcccttccatg
gagcttggcgagcttgcgctgggccgcaatgtgcttgttgccttcatgacttgggacggc
tataactatgaggatgcgatcatcatgagcgaacgccttgtaaaagacgacgtttataca
tccatccacattgaagaatatgaatcagaatcaagagatacaaagctagggcctgaagaa
atcacccgcgacatcccgaatgtcggtgaagatgcactccgcaatcttgatgagcgcgga
atcatccgtacgggtgctgaagtaaaggatggcgacctgcttgtcggtaaggttactcct
aagggtgtaacagagctgacagcagaagaacgcctcctgcatgccatctttggcgagaaa
gcccgtgaagtgcgtgatacttcccttcgtgttcctcacggaggaggcggaatcgtgctt
gatgtcaaagtcttcaaccgtgaagacggagatgagctgccgccaggcgtgaaccagctt
gtacgtgtttatatcgttcagaagcgtaaaatctccgagggagataaaatggcaggacgc
cacggaaataaaggggttatctcccggatccttccggaagaagatatgccttaccttcca
gatggcacaccagtcgacatcatgttgaatccgctgggggttccttcccgtatgaacatc
gggcaggtgcttgagcttcacctcggcatggctgcgagagcgctgggcattcacgttgct
tcaccggtatttgatggagcgcgcgaggaagatgtctggtcaacaattgaagaagccggc
atggcccgtgatgcgaagacagtcctgtacgacggccgttcgggagaaccgttcgacaac
cgtgtatctgtcggcgtcatgtacatgatcaaactggcccacatggttgatgataagctc
catgcccgttcaaccggcccttactcacttgttacgcagcagcctcttggcggtaaagcc
cagttcggcggacagcgtttcggggagatggaggtttgggcgcttgaagcttacggtgcc
gcctatacattgcaggaaatcctgacagttaaatcagatgacgtagtcggacgtgtgaaa
acgtacgaagcgattgtcaaaggcgagaatgtacctgagccgggagtgccggagtccttc
cgcgtattgatgaaagagcttcagagcttgggtatggatgttaagatcctgtcaggcgat
gagaaagaaattgaaatgcgcgaccttgaggacgatgatgatgtacagcaggctgaatcg
ctgaccatcgcgccggatacagaggaagcaaacactgaaaaagtagctagcaaagaataa
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