Bacillus infantis: N288_18300
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Entry
N288_18300 CDS
T02860
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
bif
Bacillus infantis
Brite
KEGG Orthology (KO) [BR:
bif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bif03019
]
N288_18300
03009 Ribosome biogenesis [BR:
bif03009
]
N288_18300
Enzymes [BR:
bif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
N288_18300
Messenger RNA biogenesis [BR:
bif03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
N288_18300
Ribosome biogenesis [BR:
bif03009
]
Prokaryotic type
rRNA helicases
N288_18300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AGX05542
UniProt:
U5LG12
LinkDB
All DBs
Position
complement(3337019..3338329)
Genome browser
AA seq
436 aa
AA seq
DB search
MTETKFERYELKPFIIEAVKKLGFYEPTEIQERLIPIILKGDSAIGQSQTGTGKTHSYIL
PILQKIDPSRQGVQAVITAPTRELATQIHKEVLKVTEQADGDEEISSKLFIGGTDKQRTI
EKLKVQPQVVVGTPGRINDLVKENALLVHTASMLVVDEADLMLDMGFLEDVDQVAGKMPE
KLQMLVFSATIPEKLKPFLKKYLENPKFVQIEPKQIAAAKIEHYLLPSKHKNKTEIVFRA
LEAFNPYLAIVFTNTKKKADEVADALMQKGLKVGRIHGDLSPRERKKMMKQIMDLEFQYI
VATDLAARGIDIQGISHVINYELPTDLDFYIHRVGRTARAGSSGIALTIYDTSDEDALNR
LEKLGIEFKHVDLQKGEWIDLGDRNRRKKRQRQTDEIDAHAQSRVKKPKNVKPGYKKKIQ
REVESIKKRQRRLKKK
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaacgaaattcgaacgctacgaacttaagccatttattatagaagctgtcaaa
aagctcgggttttatgagcccacagaaatacaggaacgcctgatcccgattatccttaaa
ggggatagtgcgattggacagtcccagacaggcaccgggaagactcattcctatattttg
ccgatccttcagaaaattgatccttcgaggcagggggtacaagctgtcataactgctccg
acaagggagctggccacccagatccataaggaagtacttaaagtaacagagcaggctgat
ggcgatgaggaaatcagctccaaactgtttatagggggaacagataaacagaggacaatt
gagaagctgaaagtgcagccccaggtagtagtagggacaccgggccggatcaacgacctg
gtcaaggaaaatgcacttctcgtccataccgcttcaatgctggtcgtggatgaagctgat
ctgatgctggatatgggcttccttgaagatgtagaccaggttgcaggcaagatgcctgaa
aagcttcaaatgcttgtattctcggcaacaatcccggaaaagctgaagccatttctgaaa
aagtatctggaaaatccaaaattcgtccaaatagagcccaagcagattgcagctgcaaaa
attgagcattatctgctcccttcaaagcacaaaaataagacggaaattgtctttcgtgca
ttggaggcatttaatccatatttggcgatcgtctttacaaatactaagaaaaaggctgat
gaagtcgcagatgcccttatgcaaaaaggcttaaaagtaggccgcattcacggagatctc
agccctcgtgagcgcaagaagatgatgaagcagattatggatctggaattccagtatatt
gttgcgaccgatcttgctgccagaggcatcgatatccagggaatcagccatgtgatcaat
tatgagctgccgaccgatctggacttttacatccaccgtgtaggccgcacggcaagagca
ggatcttccggcatcgctctcacgatttatgatacgtcagatgaagatgcgctgaacagg
ctggaaaagctggggatcgagttcaagcatgttgatcttcaaaagggtgaatggattgat
ttgggcgaccgcaatagacggaaaaagcggcaaaggcagacggatgagattgatgcccat
gctcaatcccgtgtgaaaaaaccgaaaaatgtaaagccaggctataaaaagaaaatacaa
agagaagtagagagcatcaagaaacgccaaagaaggcttaaaaagaaataa
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