Bifidobacterium indicum: BINDI_0887
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Entry
BINDI_0887 CDS
T03564
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
bii
Bifidobacterium indicum
Pathway
bii03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bii00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BINDI_0887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bii03021
]
BINDI_0887
03400 DNA repair and recombination proteins [BR:
bii03400
]
BINDI_0887
Enzymes [BR:
bii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BINDI_0887
Transcription machinery [BR:
bii03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BINDI_0887
DNA repair and recombination proteins [BR:
bii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BINDI_0887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AIC92154
UniProt:
A0A087VUY9
LinkDB
All DBs
Position
complement(1174567..1174851)
Genome browser
AA seq
94 aa
AA seq
DB search
MAFGTEPHPQGFANPPIDDLMQHADSKYALSIFAAKRARQINSYFTQLNEGLLQNVGPLV
EYQNQEKPLSIAFREIDEGLLEETLGEDDLSEGN
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atggcatttggcaccgagccccatccacagggatttgcgaatcctcccatcgacgatctg
atgcagcacgccgattcgaagtacgccctgtccatctttgcggccaagcgcgcccgccag
atcaattcctacttcacccagctcaacgagggcctgctgcagaacgtcggccccctggtc
gaataccagaaccaggaaaagcccctctccatcgccttccgcgagatcgatgaaggactg
ctggaggagaccctgggcgaggatgatctgagcgaaggcaactga
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