Bradyrhizobium diazoefficiens USDA 110: bll7349
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Entry
bll7349 CDS
T00109
Symbol
sigA
Name
(GenBank) primary sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
bja
Bradyrhizobium diazoefficiens USDA 110
Pathway
bja02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bja00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
bll7349 (sigA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bja03021
]
bll7349 (sigA)
Transcription machinery [BR:
bja03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
bll7349 (sigA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
Dict-STAT-coil
Motif
Other DBs
NCBI-ProteinID:
BAC52614
UniProt:
H7C819
LinkDB
All DBs
Position
complement(8085311..8087470)
Genome browser
AA seq
719 aa
AA seq
DB search
MATKAKTLQAKDKEKDDKAADAPEKDSQDAPSPLLDLSDAAVKKMIKQAKKRGFVTFDQL
NEVLPSDQTSPEQIEDIMSMLSDMGINVTEADDSEGEEDKDEGGEDETDNELVEVTQKAV
TEVKKSEPGERTDDPVRMYLREMGTVELLSREGEIAIAKRIEAGREAMIAGLCESPLSFQ
AIIIWRDELNEGKIFLRDIIDLEATYAGPEAKGGMNTAMIGGPTGENGEATAEGGEAVAV
TGAAPAHVAPPAAPPAPTPFRAAPAAGNGAEAEKDPGEAAAEADMDEDDEFENQMSLAAI
EAELKPKVVEIFDKIAESYKKLRKLQEQDIQNQLESTSHGPSLSPHQERKYRKLKDEIIV
EVKSLRLNQARIDSLVEQLYDINKRLVSHEGRLMRLADSHGVAREDFLRNYTGSELDPRW
LNRVSKLSAKGWKNFVHHEKDRIKDLRHEVHQLAALTGLEIVEFRKIVHSVQKGEREARQ
AKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWW
IRQAITRSIADQARTIRIPVHMIETINKIVRTSRQMLNEIGREPTPEELAEKLGMPLEKV
RKVLKIAKEPLSLETPVGDEEDSHLGDFIEDKNAILPIDAAIQSNLRETTTRVLASLTPR
EERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLDN
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaaggcaaagacgctgcaggcgaaggacaaggaaaaagacgacaaggcagcg
gatgctcccgagaaggattcccaggacgcgccctcgccgttgctcgatctgtccgacgcg
gccgtgaagaagatgatcaagcaggccaagaagcgcggcttcgtgaccttcgatcagctc
aatgaagtgttgccgtccgaccagacctcgcccgagcagatcgaggacatcatgtccatg
ctctcggacatgggcatcaacgtcaccgaagccgacgatagcgaaggcgaggaagacaag
gacgagggcggcgaggacgagaccgacaacgagctcgtcgaggtcacccagaaggccgtc
accgaggtcaagaagagcgagccgggcgagcgcaccgacgatcccgtgcgcatgtatctg
cgcgagatgggcaccgtcgagctgctctcccgcgaaggcgaaatcgcgatcgccaagcgc
atcgaggccggccgcgaggcgatgatcgcagggctgtgcgaaagcccgctgagcttccag
gccatcatcatctggcgcgacgagctcaacgaaggcaagatcttcctccgcgacatcatc
gatctcgaagcgacctatgccggccccgaagccaagggcggcatgaacaccgcaatgatc
ggcggccccaccggtgagaacggcgaagccacggccgagggcggcgaagcggttgcagtg
accggggctgcgcccgcgcatgtcgccccgcccgccgcgccgccggcgccgaccccgttc
cgcgccgcgcctgccgccggcaacggcgccgaggccgagaaggatccaggcgaggccgcc
gccgaagccgacatggacgaggacgacgagttcgagaaccagatgtcgcttgccgcgatc
gaggccgagctcaagcccaaggtcgtcgagatcttcgacaagatcgccgagagctacaag
aagctgcgcaagcttcaggagcaggacatccagaaccagctcgagagcacctcgcatggg
ccctcgctctcgccgcaccaggagcgcaagtaccgcaagctcaaggacgagatcatcgtc
gaggtgaagtcgctgcgcctcaaccaggcgcgtatcgacagtctcgtcgagcagctctac
gacatcaacaagcgcctcgtctcgcatgagggccgcctgatgcgtctcgccgacagccac
ggcgtcgcgcgcgaggatttcctgcgcaactacaccggctcggagctcgatccgcgctgg
ctcaaccgcgtctcgaagctgtcggccaagggctggaagaacttcgtccaccacgagaag
gaccgcatcaaggacctccgccacgaggtgcatcagctcgctgcgctcaccggcctggag
atcgtcgagttccgcaagatcgtgcactccgtgcagaagggcgagcgcgaagcccgccag
gccaagaaggagatggtggaagccaacctccgtctcgtgatctcgatcgcgaagaagtac
accaaccgcggcctgcagttcctcgacctgatccaggaaggcaacatcggcctgatgaag
gccgtcgacaagttcgagtatcgccgcggctacaagttctcgacctacgccacgtggtgg
atccggcaggcgatcacccgctcgatcgccgaccaggcgcgcaccatccgcatccccgtg
cacatgatcgagacgatcaacaagatcgtgcgcacgagccgccagatgctcaacgagatc
ggccgcgagccgacccctgaagagctcgccgagaagctcggcatgcccttggagaaggtc
cgcaaggtcctcaagatcgccaaggagccgttgtcgctcgaaacccccgtcggtgacgag
gaggattcgcatctcggcgatttcatcgaggacaagaacgcgatcttgccgatcgacgcc
gcgatccagtcgaacctgcgcgagaccaccacgcgcgtgctcgcctcgctcactccgcgc
gaagagcgcgtgctgcgcatgcgcttcggcatcggcatgaacaccgaccacacgctggaa
gaagtcggccagcagttctcggtgacccgcgagcgtattcgccagatcgaggccaaggcg
ctgcgcaagctgaagcatccgtcgaggagccggaagctgcggagcttcctggataactaa
DBGET
integrated database retrieval system
