Bacillus sp. JS: MY9_2103
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Entry
MY9_2103 CDS
T02027
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bjs
Bacillus sp. JS
Pathway
bjs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bjs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MY9_2103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bjs03019
]
MY9_2103
03400 DNA repair and recombination proteins [BR:
bjs03400
]
MY9_2103
Enzymes [BR:
bjs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MY9_2103
Messenger RNA biogenesis [BR:
bjs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MY9_2103
DNA repair and recombination proteins [BR:
bjs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MY9_2103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AFI28637
LinkDB
All DBs
Position
complement(2136259..2138034)
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AA seq
591 aa
AA seq
DB search
MLHRAQSLLAHYFGYEKFRSGQDEAIRLVTEARQNTACIMPTGGGKSICYQIPALMFEGT
TIVISPLISLMKDQVDALEEAGINAAYINSTQSNQEIYERLNGLKEGAYKLFYITPERLT
STEFIRILQGIDVPLVAIDEAHCISQWGHDFRPSYRNIEILFRELHDKPVIMALTATATP
EVHDDICKQLHIQKENTVYTGFSRENLTFKVVKGENKDRFIDEYVQNNRHEAGIVYTATR
KEADRIYERLKRNQIRAGRYHGGLADDVRKEQQERFLNDELQVMVATSAFGMGIDKSNIR
FVLHAQIPKDMESYYQEAGRAGRDGLASECVLLFSPQDIMVQRFLIEQSEHEEKQKQDLK
KLRQMVDYCHTEDCLQRFILMYFGEKEPDACGQCGNCTDTRAAHDVTREAQMVLSCIIRM
KERFGKTIVAQVLAGSKNKKVLENGFSDLSTYGILKHQSVGEISDFIEFLISDDFIRMSD
GTFPTLFVSSKGRNVLRGELSVTRKEALKAAAITENDELFERLRMVRKEIAAEQGVPPFV
VFSDQTLKEMSGKQPVNDEELLSIKGVGEQKRAKYGRLFLQEIQAYARMTD
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgttacatagagcccaatcccttctggctcattattttggttatgaaaagtttcgcagc
ggccaggatgaagcgatccgcttggtaacggaagcgaggcaaaatacggcctgtattatg
ccaacgggaggcggcaaatcgatttgctatcaaattccagcattaatgtttgaagggacg
acgatcgtcatttcaccgttgatttccttgatgaaggatcaagttgatgcattagaagaa
gcggggattaacgccgcctacattaatagcacacaatccaatcaggaaatatacgagagg
ctgaacggactcaaagaaggggcttataagcttttttacattacaccagagcgactaacg
tccacggagtttatccggattttgcagggcatagatgttcctttggtcgcaatagacgag
gcgcactgtatttctcaatgggggcacgatttcaggccaagctacagaaatattgaaatt
ttgttccgtgaattacacgacaagcctgtcatcatggcgttaacagcaacagccacaccc
gaggttcatgatgatatttgcaaacagctgcacattcaaaaagagaacacggtatatacc
ggattttcacgagaaaatttaacctttaaagtagtaaaaggagaaaataaagaccgtttt
atagatgaatatgtgcaaaacaacagacatgaagcaggaattgtctataccgcgaccaga
aaagaagctgatcggatatatgagagattgaaacgaaatcagatcagggcagggcggtat
cacggaggtttggctgatgatgtgagaaaagagcagcaggaaaggtttcttaatgatgag
cttcaagtgatggtggcaacctctgcttttggaatggggattgataaatcaaatatcaga
tttgttctgcatgcacaaattccaaaagatatggaaagctattatcaagaggctggacga
gctgggcgggacggccttgccagtgaatgtgttctcctgttttcaccgcaggatattatg
gtgcagcgcttcttaattgagcaatcagaacatgaagagaaacaaaagcaggatttaaaa
aagctgagacaaatggtcgactattgtcatacggaagattgtctgcagcgttttatcctt
atgtatttcggagaaaaggagcccgatgcgtgcggacaatgcggaaactgcactgataca
agggcggcccatgacgtgacgcgggaggcgcaaatggtcttatcttgtatcattcgcatg
aaagaacgatttggcaagacgatagttgcccaagtgcttgccggctccaaaaataaaaaa
gttcttgaaaacggtttttcggacctttcaacatacggaatattaaaacaccaatcagtt
ggcgaaatcagtgattttattgaatttcttatttctgacgactttatcaggatgtcagat
ggtacgtttccgactctttttgtcagcagtaaaggaaggaatgtgctgagaggagaatta
tcagtcacgagaaaagaagcgttaaaagcggcagcgattactgaaaatgacgagctgttt
gaacgattgcgcatggttcggaaagaaatcgcggctgagcagggtgttccgccatttgtt
gttttctctgaccaaacgttaaaagaaatgtcaggaaaacagcccgtaaatgatgaggaa
cttttgtctataaaaggagtcggagaacaaaaaagagcaaaatacggccggcttttttta
caagaaatacaggcttatgcaaggatgacagactaa
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