KEGG   Bacillus krulwichiae: BkAM31D_12620Help
Entry
BkAM31D_12620     CDS       T04947                                 

Definition
(GenBank) Putative DNA ligase-like protein/MT0965
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
bkw  Bacillus krulwichiae
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:bkw00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    BkAM31D_12620
   03410 Base excision repair
    BkAM31D_12620
   03420 Nucleotide excision repair
    BkAM31D_12620
   03430 Mismatch repair
    BkAM31D_12620
Enzymes [BR:bkw01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BkAM31D_12620
    6.5.1.6  DNA ligase (ATP or NAD+)
     BkAM31D_12620
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     BkAM31D_12620
DNA replication proteins [BR:bkw03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    BkAM31D_12620
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     BkAM31D_12620
DNA repair and recombination proteins [BR:bkw03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     BkAM31D_12620
   NER (nucleotide excision repair)
    Other NER factors
     BkAM31D_12620
   MMR (mismatch exicision repair)
    Other MMR factors
     BkAM31D_12620
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(2313004..2313732)
Genome map
AA seq 242 aa AA seqDB search
MFLSPMLLKEVDTPPEDYANVITELKLDGIRIIFSNLNNNPRLYTRTGHDVTHLFPELIS
VQLPKGVILDGELIVPDRNNKPSYRLLMDKIKQKETTLSVQYVAYDLLYYRGEKITQFPL
LKRKKILDQIIPTDTITIVTSQWFEGNSQTYFEVVKRYGLEGIVVKKPMSKYRCGVRSGD
WVKILNRDYEDNLTLRSDFESWLVNDNKKKVVFLNIQLKKNRKNLYEYYRKFITGNKKDS
SQ
NT seq 729 nt NT seq  +upstreamnt  +downstreamnt
atgtttttatctccgatgttattaaaagaggttgatacacccccagaagattatgctaat
gtcattactgaattaaaattagatgggattcgaataatattttctaacttaaacaacaat
cctcgtttgtatactcgcacaggtcatgatgtaacccatttatttcctgagctcatttct
gtgcaattaccaaaaggagtcattttagacggagaattaattgtacccgatcgtaataat
aaaccaagttataggctcttgatggataaaatcaaacaaaaagagactactctttctgtg
caatatgtagcgtatgatctattgtattatcgaggggagaaaattactcaattcccactt
ttaaaacgcaagaagatactagatcaaatcattcctactgataccattacgattgtaact
tctcaatggtttgaaggaaactcacaaacctattttgaagtcgtaaaaagatatggacta
gaaggaattgtagtgaaaaaacctatgtcaaaatatcggtgtggtgttcgctcaggtgac
tgggttaaaatcctcaatcgagattatgaggataatctaactttgagaagtgacttcgag
tcttggctagtaaatgataataaaaagaaggttgtctttttaaatatacaattaaaaaag
aatcggaaaaacttatatgaatattaccgtaaatttattaccggtaataaaaaggattct
tcacaataa

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