KEGG   Bifidobacterium animalis subsp. lactis AD011: BLA_1170
Entry
BLA_1170          CDS       T00819                                 
Symbol
hup
Name
(GenBank) DNA-binding protein HB1
  KO
K03530  DNA-binding protein HU-beta
Organism
bla  Bifidobacterium animalis subsp. lactis AD011
Brite
KEGG Orthology (KO) [BR:bla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bla03032]
    BLA_1170 (hup)
   03036 Chromosome and associated proteins [BR:bla03036]
    BLA_1170 (hup)
   03400 DNA repair and recombination proteins [BR:bla03400]
    BLA_1170 (hup)
DNA replication proteins [BR:bla03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    BLA_1170 (hup)
Chromosome and associated proteins [BR:bla03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    BLA_1170 (hup)
DNA repair and recombination proteins [BR:bla03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      BLA_1170 (hup)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_2 HU-DNA_bdg
Other DBs
NCBI-ProteinID: ACL29458
UniProt: B8DTX9
LinkDB
Position
complement(1483539..1483820)
AA seq 93 aa
MAYNKSDLVAKISQKSGLTKAQAEAAVNAFRDVFIEAMKNGEGLKLTGLLSAERVKRAAR
TGRNPRTGETIEIPATYGVRISAGSLLKKAVSE
NT seq 282 nt   +upstreamnt  +downstreamnt
atggcatacaataagtctgatctcgttgcaaagatctcccagaagtccggtctcaccaag
gctcaggctgaggctgccgtcaatgctttccgcgatgtcttcatcgaagccatgaagaac
ggcgaaggcctcaagctcaccggtctgctctccgcagagcgcgtcaagcgcgccgcccgc
acaggccgcaatccccgtaccggtgagaccattgagatcccggccacctatggtgttcgc
atctccgctggctccctgctgaagaaggcagtgagcgagtga

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