KEGG   Bacillus licheniformis DSM 13 = ATCC 14580: BLi01538Help
Entry
BLi01538          CDS       T00200                                 

Gene name
ligB
Definition
(GenBank) phage ATP-dependent DNA ligase LigB
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
bld  Bacillus licheniformis DSM 13 = ATCC 14580
Pathway
bld03030  DNA replication
bld03410  Base excision repair
bld03420  Nucleotide excision repair
bld03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bld00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    BLi01538 (ligB)
   03410 Base excision repair
    BLi01538 (ligB)
   03420 Nucleotide excision repair
    BLi01538 (ligB)
   03430 Mismatch repair
    BLi01538 (ligB)
Enzymes [BR:bld01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BLi01538 (ligB)
    6.5.1.6  DNA ligase (ATP or NAD+)
     BLi01538 (ligB)
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     BLi01538 (ligB)
DNA replication proteins [BR:bld03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    BLi01538 (ligB)
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     BLi01538 (ligB)
DNA repair and recombination proteins [BR:bld03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     BLi01538 (ligB)
   NER (nucleotide excision repair)
    Other NER factors
     BLi01538 (ligB)
   MMR (mismatch exicision repair)
    Other MMR factors
     BLi01538 (ligB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M RNA_ligase mRNA_cap_enzyme DNA_ligase_OB_2
Motif
Other DBs
NCBI-ProteinID: AAU40439
LinkDB All DBs
Position
complement(1509475..1510284)
Genome map
AA seq 269 aa AA seqDB search
MFIWPMLLESAKEPFNSDDYITETKFDGIRLIASRNNGLIRLYTRHNNEVTAKFPELLTL
DIPDETILDGELIVPGSTGAGDFEAVMERFQSRKSFYPIVFCVFDVLRIEGVSVTSKPLS
ERKELLAGLKLDHPNVKIVEGVRGHATDYFELVRENKIEGIVMKQANAPYAENKRSDRWL
KIVNYEYTDVLISGLRKEDNALLLSYLDGQYAGIMEFMPYDARRKFHAERLIVEETEKYA
YIEPIGCRVKHRFKTKNGLLRIPSFHEWR
NT seq 810 nt NT seq  +upstreamnt  +downstreamnt
ttgtttatttggcccatgctgcttgagtccgcaaaggagccgtttaactcggacgactat
atcacggaaaccaaattcgacggcatccgtctgatcgcgtccaggaataacggtttaatc
cgcctctacacacgccacaacaacgaagtcaccgctaaatttccggaactattaacgctc
gacataccggatgaaactattttagacggcgagcttatcgtacctggatcgacaggcgcc
ggcgattttgaggccgtcatggaacgattccagtcgcggaaaagtttttatccgatagta
ttttgcgtttttgatgtcctgcggatagaaggcgtttcagttacgtctaagccgctaagt
gaacgaaaagaattgctggccggtctaaaactcgatcatcctaacgttaaaatagtcgag
ggcgtgcgcggccatgctacggattatttcgaattagtccgcgaaaataagatcgagggc
atcgttatgaagcaggcaaacgctccgtatgcggaaaataagcggtcagatcgctggctg
aagatcgttaactacgaatatactgacgttctgatatcaggactccgcaaggaagacaat
gcgctgcttctttcgtacctggacggccagtatgccggcattatggagtttatgccgtat
gatgcgcggcggaagtttcatgcggagcggctaatcgtagaagaaacggagaaatacgcc
tacatcgagccaattgggtgccgcgtcaagcaccggttcaagacgaaaaacggtttgttg
cggattccttcgttccatgaatggcgttga

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