Bifidobacterium longum subsp. infantis 157F: BLIF_1724
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Entry
BLIF_1724 CDS
T01420
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
blf
Bifidobacterium longum subsp. infantis 157F
Pathway
blf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
blf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BLIF_1724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
blf03021
]
BLIF_1724
03400 DNA repair and recombination proteins [BR:
blf03400
]
BLIF_1724
Enzymes [BR:
blf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BLIF_1724
Transcription machinery [BR:
blf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BLIF_1724
DNA repair and recombination proteins [BR:
blf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BLIF_1724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
BAJ71859
LinkDB
All DBs
Position
complement(2018669..2019664)
Genome browser
AA seq
331 aa
AA seq
DB search
MLIAQRPTLTEESLNPQRSRFTIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSVRISGAL
HEFTTLPGVQEDVTEILLNIKGIVLTSEYDEPVVMYLRKSGKGEAVAGDITPPAGVTIAN
PEQHIATLADDGELEIEFTVERGRGYVPAQMNKQDNDEIGRIPVDSIYSPVLKVSYKVEA
TRVEQRTDFDKLILDVETKPAISPRDAVASAGSTLVELFGLCRELNAQAEGVEVGPAPVA
EETNPEMAVPIEDLNLTQRSYNCLKREGIHTIGELVSHTEQDLLDIRNFGMKSIDEVKEK
LQTLGLSLKSSPMAFDTNNLEGGTFFSPEDE
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
gtgcttattgcacagcgtccgactcttaccgaggaatctctgaatccgcagcgctcccgc
ttcaccatcgagccgctcgagcctggcttcggctacacgctcggcaactcgctgcgtcgc
acgctgctgagctccatcccgggtgctgccgtgacctccgtgcgtatttccggtgccctg
catgagttcaccactctgccgggtgtccaggaagacgtcaccgagatcctgctgaacatc
aagggcatcgtgctcaccagcgaatacgacgagcctgtggtcatgtatctgcgcaagagc
ggcaagggcgaagccgtggctggggacatcaccccgccggccggcgtcaccattgccaac
ccggagcagcacatcgctaccctcgccgacgatggcgaactcgagatcgagttcactgtc
gagcgtggccgtggctatgttcctgcccagatgaacaagcaggacaacgatgagatcggc
cgtattccggttgattccatctactccccggtactcaaggtgagctacaaggtcgaggcc
acccgtgtggaacagcgcacggacttcgacaagctcatcctggacgtggagaccaagccc
gccatctccccgcgtgacgcggtggcttccgccggttccaccttggtggagctcttcggc
ctgtgccgtgagctcaacgcccaggctgaaggcgtcgaggtcggtccggccccggtggcc
gaggagaccaaccccgagatggccgttccgattgaggacctcaacctgacgcagcgttct
tacaactgcctcaagcgcgagggcatccacaccatcggtgagcttgtctcccacaccgag
caggacctgctcgacatccgcaatttcggtatgaagtcaatcgatgaggtcaaggagaag
ctgcagaccttgggcctgagcctcaagtcctcgccgatggccttcgataccaataatctc
gaaggtggcacgttcttctcgccggaagacgagtga
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