Bifidobacterium longum DJO10A: BLD_0258
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Entry
BLD_0258 CDS
T00707
Symbol
xthA
Name
(GenBank) Exonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
blj
Bifidobacterium longum DJO10A
Pathway
blj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
blj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BLD_0258 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blj03400
]
BLD_0258 (xthA)
Enzymes [BR:
blj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
BLD_0258 (xthA)
DNA repair and recombination proteins [BR:
blj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BLD_0258 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
PIF1
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ACD97704
UniProt:
B3DQV8
LinkDB
All DBs
Position
complement(323937..324797)
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AA seq
286 aa
AA seq
DB search
MTITITTSNVNGIRAAKRKGIEDWAGKHAPDVWCIQEVRAPQDDVDSIFDEFGFEYATAG
KIEAPANLHAMNEVCRVKGRAGVGLLTDLEVLDKRYGLPGLSEDVDSGRWIETDVKTPEG
YAITVASVYVHAGNTDYPTKMEQKYRFLDTMLKRMGALRDEAAHGGKQAVLCGDFNIAHT
PLDIKNAKANEKHAGFLPEERAYVDKWLDEYEFVDVMRSLAGDIQGPYTWWSQRGRAFDN
NVGWRIDYQFATPELAETARGFVIDKAPTYDKRWSDHAPLTITYEV
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcaccattaccacgtctaacgtcaacggcattcgtgcggccaagcgcaagggc
atcgaggattgggccggcaagcatgcgccggatgtctggtgcatacaggaggttcgcgcg
cctcaggacgatgtcgattctattttcgatgaatttggtttcgaatacgccaccgccggc
aagatcgaggcaccggccaacctccatgccatgaacgaggtctgccgggtgaaaggccgc
gcgggagtcggactgctcaccgacttggaagtgcttgacaagcgatatgggctgccaggt
ctgagcgaggatgtggattcagggcgttggatcgaaaccgatgtcaaaacgcctgagggc
tacgcgatcaccgtggcatccgtatatgtgcatgctggcaacaccgattatccgaccaaa
atggaacagaagtaccgttttctggacacgatgctgaagcgcatgggcgcgttgcgggac
gaggctgcgcatggcggcaaacaggccgtgctctgcggcgatttcaacatcgcgcacacg
ccgcttgatatcaagaacgccaaggccaatgagaagcacgccggatttctgcccgaagaa
cgtgcctacgtggacaaatggctggacgaatacgagttcgtggatgtgatgcgttcgttg
gccggcgacattcaggggccatacacctggtggagccagcgagggcgcgctttcgacaac
aatgtcggctggagaatcgactaccagttcgccacgcccgagttggcggagaccgcacgc
ggattcgtcatcgacaaggctcccacgtatgacaaacgctggtccgatcacgccccactc
acgatcacatacgaggtatga
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