Salinivirga cyanobacteriivorans: L21SP5_00530
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Entry
L21SP5_00530 CDS
T04172
Symbol
sbcC
Name
(GenBank) Nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
blq
Salinivirga cyanobacteriivorans
Brite
KEGG Orthology (KO) [BR:
blq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blq03400
]
L21SP5_00530 (sbcC)
DNA repair and recombination proteins [BR:
blq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
L21SP5_00530 (sbcC)
Archaeal homologous recombinant proteins
L21SP5_00530 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_21
SMC_N
AAA_29
AAA_13
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ALO14206
UniProt:
A0A0S2HVW2
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All DBs
Position
complement(629076..632129)
Genome browser
AA seq
1017 aa
AA seq
DB search
MIPETLKIKGIYSYRHEAVINFEQLTDAGLFGIFGKVGSGKSTVLEAISFAMYGETERLN
NRDSKLYNMMNLRSNELEIDFTLRHLNERYRFVATARRNSKNFTEITKSERKAYHWNEGQ
WIPLESADATEIIGLRYEHFKQIVIIPQGKFNEFVQLSASDRTKMMRELFPLDRFDLREP
VSRLHAETKTAITALEGRLQELTEYSPEKMKALEQELATHQQNIKKKKAYLSEQETALKK
AAELKKLNAAFIETQNQIAELNQQKSGIDMLKRQVDTFEKVRLRYGAILQRLSEIEQEIE
RLKKQEQIQEQELQAVGEKMKQAQTRHKEILDQNGDEENHRQQITGAEKALDIKSSQKAI
EHLNEQLQQERENLEKIEEEWTKRKKERNEKQQSLLKIREQLPDESALYALQNSFKEEDN
LRQRLKTAQEEHESVHRLIEELKTQRIEIVKSVAQYLQLRKPYRELMLSEARLAFQESIE
NKKVTLEELQTLKSDLDVKSGLAAHAESLKPGEKCPLCGATEHPEPYSDEALTKEKHDVQ
EQIDAQQKHREALNEALIQLNGLEDRFKKERDQIKSREKQVEEAKKLLSQCIEDRENLSV
QFSRDQLTVALESLKQQKTEVQKLEQSIQQLDQQLEDQSNIETLKQKIQEKTNKMAGLES
RIELQKGEVEESWLTLSAGQLQAKQKDVRESLEKLFELTSGIQELEKQYQRLEVELSGTN
KQLKAQQELKSERESEINEQLKVDGFKDRSTITGILAQAIDIDESRKKIETFYQQLHTNE
ARLKELEKEIGDQQFDEESYRKLEKQVSEQREHLSQMETKTGELQSQIKVLKEKLQLKLQ
HTKDLEIQEKRKSNLDVLSRLFRGDGFVKYVSQIYLEQLCTIANERFKQLTHNQLELGID
EKYNFIVRDFLHDGRTRLLKTLSGGQTFQAALSLAMALSEQIQQYHKVKQQFFFMDEGFG
SLDRESLSLVFDTLKQLRKEQRIVGIISHVEELQTEIDRYLMVENDDEEGSKIKFVG
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgattcccgaaacacttaaaattaaaggtatttattcttatcgccacgaagcggttatc
aattttgaacagcttactgatgcagggttgtttggaatatttggtaaggtcggtagtggc
aagtccaccgtgcttgaagccatttcgtttgctatgtatggcgaaactgaacgcctcaat
aatcgcgattccaagctttacaatatgatgaacctccggagcaatgagcttgaaattgat
tttactttacgacacctgaatgaacgatatcgttttgtggccactgcccgtcgcaatagc
aaaaattttactgaaataactaaaagtgagcgtaaggcttaccattggaatgaaggacaa
tggataccgctggaaagtgccgatgccactgaaattatagggctccgctatgagcatttt
aagcaaattgtgattattccacaaggtaagttcaatgagtttgtgcaactctctgcctca
gatcgtacaaaaatgatgcgcgagcttttccccctcgacaggttcgatttgcgggaaccg
gtaagcagactgcacgctgaaactaaaacagccatcaccgctttagaggggcgcttgcag
gagctgacagaatattcgcccgaaaaaatgaaggcgcttgaacaggagttggcaacacat
cagcaaaatataaaaaagaaaaaagcctacctctcagagcaggaaacagcccttaaaaag
gctgctgaacttaaaaagttaaatgccgcttttattgaaacccaaaaccagattgctgag
cttaatcagcagaaatccgggattgatatgttgaaaaggcaggtagatacttttgaaaag
gttcgtttgcgctatggagcaattctgcaacgactcagtgaaattgaacaggaaattgag
cgtctgaagaagcaggagcaaatccaggagcaggagttgcaggcagtaggggagaaaatg
aagcaagctcaaaccaggcacaaggaaattcttgatcaaaatggtgatgaggaaaatcac
aggcaacagataaccggggcagaaaaagcactggatattaaaagtagccaaaaggcaatt
gagcatctcaacgaacagctgcaacaagaacgtgaaaaccttgaaaagatagaggaagag
tggaccaaaagaaaaaaagagcgcaatgaaaagcagcaatcgttgctgaaaattcgagag
cagttgcccgacgaatcagcgctttatgccttacaaaacagttttaaagaagaagataat
ttgcgtcagcggcttaaaacagcacaggaagaacatgaaagtgttcatcggttaattgag
gaactcaaaacccaacgaattgaaattgttaaaagtgtagctcagtacttacaattgaga
aagccttatagagaactaatgcttagtgaggcgcggcttgcttttcaggaatcaattgaa
aataagaaggttacgctggaggaattacaaacacttaaatcagatttagatgtaaagtcg
gggcttgctgcccatgcagaatcactgaaacccggtgaaaaatgtcctttgtgtggggct
acagagcaccctgaaccatactctgatgaagccctgacaaaagaaaaacatgacgtacaa
gagcaaatagacgcacagcaaaagcaccgcgaagcactgaatgaagccctgattcaattg
aacggattagaagaccgctttaaaaaagagcgtgatcagataaaatcccgggaaaagcag
gttgaagaggctaaaaaattgctatcccaatgtattgaagatcgcgaaaatttatcagtc
cagttttctcgtgatcaattaaccgttgcattggaaagccttaaacagcaaaaaactgag
gtgcaaaagcttgagcaatcaattcaacagctcgatcaacagctcgaagatcaatctaac
attgaaacattaaagcagaaaattcaggaaaaaaccaataagatggcggggctggagtcg
cgcattgaactgcaaaagggcgaagttgaggaatcatggctgactctatctgccgggcaa
ttgcaagcaaaacagaaagatgtacgagaaagccttgagaaattgtttgagcttacatct
ggtattcaggagcttgaaaaacagtatcagcggcttgaggtggagctgtcgggaaccaac
aaacagctcaaagctcagcaagaattaaaatcagagcgggagtctgaaataaatgagcaa
ttaaaggttgatggatttaaagaccggtcgacgattacaggaattttagcgcaggcaata
gatattgatgaaagtcgtaaaaagattgagacgttctatcaacagttgcataccaatgag
gctcgattgaaagagctggagaaagaaattggcgatcaacaatttgatgaggaatcatat
cgcaaattagaaaagcaggtaagtgaacaacgggagcaccttagtcagatggaaaccaaa
accggcgaattgcaaagtcaaataaaagtattaaaagagaaattgcagctaaagttacaa
cacaccaaagaccttgagattcaggaaaagcgtaaaagcaacctggatgtactttccaga
ctattccgtggcgatggttttgtgaaatacgtgagccagatctatctcgaacaactttgt
accattgccaacgaacgatttaagcaacttacccacaatcaactggaactgggtatcgac
gaaaaatacaacttcattgtgcgcgatttcctacacgacggacgcacccgcttattgaaa
acactcagcggtggacagacatttcaggctgctttgtcgctggctatggctctgagcgaa
caaatccagcaataccacaaagtaaaacaacagtttttctttatggacgaaggatttggt
tctctcgaccgcgaatcgctgtcattggttttcgacaccttaaagcagctcagaaaagag
cagcgaatcgttggtatcatttcccatgtggaggagttacaaactgaaatagaccgatat
ttaatggtcgaaaatgatgatgaggagggaagcaaaatcaaatttgtggggtga
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