Burkholderia mallei FMH 23344: DM51_1962
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Entry
DM51_1962 CDS
T03523
Symbol
pcnB
Name
(GenBank) poly(A) polymerase family protein
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
bmaf
Burkholderia mallei FMH 23344
Pathway
bmaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DM51_1962 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmaf03019
]
DM51_1962 (pcnB)
Enzymes [BR:
bmaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
DM51_1962 (pcnB)
Messenger RNA biogenesis [BR:
bmaf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
DM51_1962 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AIP77434
LinkDB
All DBs
Position
1:2207342..2208889
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AA seq
515 aa
AA seq
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MIKKLIRKLLGQDARTTQDAPQDPAEPRSAAPAAPAGRAKPPRGAAKKPRNGAPTIVHAD
VHGIDPALISKNAIRVTDTLQQAGFRAFIVGGAVRDLLLGIAPKDFDVATDATPTEVQRL
FRRARLIGRRFQIVHVQFGQELIEVSTFRALVDAPQEPPADAAPAKRLKRDELDRRTHAV
DASGRVLRDNVWGEQHEDAARRDFTINAMYYDPASQTVLDYHDGMADMRARLLRMIGDPA
TRYREDPVRMLRVVRFAAKLGFDIEEKTREPIKELADLINNVPAARLFDEMLKLLLSGHA
LACLKQLRKQGLHHGLLPLLDVVLEQPQGEKFVTLALNNTDARVRAGKPVSPGFLFATLL
WHDMRQRFEQYSADGEFPVPALHRAMDDVIDMQTEKLAIHKRYSADMREIWGLQLRLEKR
SGRSALRLLEHQRFRAGYDFLLLRCESGELDPAVGQWWTDFIDGDAATREALLTQGGSRD
KSPRKRRRRGGRSRRTADSAEGAEGAARGESDAND
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaaaaaactcatccgcaagctgctcgggcaggacgcccgtacgacgcaagacgcg
ccgcaggacccggccgagccgcgctcggccgcgcccgccgccccggcgggccgcgcgaaa
cccccgcgcggcgccgcgaagaaaccccgcaacggcgcgccgaccatcgtgcacgccgac
gtgcacgggatcgaccccgcgctcatctcgaaaaacgcgatccgcgtgaccgacacgctg
cagcaagccggctttcgcgcattcatcgtcggcggcgcggtgcgcgacctgctgctcggc
atcgcgccgaaggatttcgacgtcgcgaccgacgcgacgccaaccgaagtccagcgcctg
ttccgccgcgcgcggctgatcggccggcgcttccagatcgtccacgtgcagttcggccag
gagctgatcgaggtgtcgacgtttcgcgcgctcgtcgacgcgccgcaggagccgcccgcc
gacgccgcgcccgcgaagcgcctgaagcgcgacgagctcgaccgccgcacgcatgcggtg
gacgcaagcgggcgcgtgctgcgcgacaacgtgtggggcgagcagcacgaggacgcggcg
cgccgcgatttcacgatcaacgcgatgtactacgatcccgcatcgcagaccgtgctcgat
taccacgacgggatggccgacatgcgcgcgcgcctgctgcgcatgatcggcgatccggcg
acgcgctaccgcgaagatccggtgcggatgctgcgcgtggtgcgcttcgcggcgaagctc
ggcttcgacatcgaggagaagacacgcgagccgatcaaggagctcgccgatctgatcaac
aacgtgccggccgcgcgcctgttcgacgagatgctcaagctcctgctgtcgggccacgcg
ctcgcgtgcctgaagcagttgcgcaagcaggggctgcaccacgggttgctgccgcttctc
gacgtcgtgctcgagcagccgcagggcgagaagttcgtcacgctcgcgctgaacaacacc
gacgcgcgcgtgcgcgcgggcaagccggtgtcgcccggcttcctgttcgcgacgctgctg
tggcacgacatgcgccagcgcttcgagcagtattcggccgacggcgagttcccggtgccc
gcgctgcatcgcgcgatggacgacgtgatcgacatgcagaccgagaagctcgcgatccac
aagcgctattcggccgacatgcgcgagatctgggggttgcagttgcgcctcgagaaacgc
agcggccgcagcgcgctgcggctgctggaacaccaaagattcagagcggggtatgatttc
ctcctgttacgctgcgaatccggcgagctcgatccggccgtcggacagtggtggacggat
ttcatcgacggcgacgccgcgacgcgcgaggcgctcctcacgcagggcggcagtcgggac
aagtcgccccgcaagcggcgccgccgcggcggacgcagccgccggacggccgacagcgcc
gagggcgcggaaggcgccgcgcgcggcgagtccgacgcgaacgactga
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