KEGG   Burkholderia mallei BMQ: DM76_3111
Entry
DM76_3111         CDS       T03490                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
bmaq  Burkholderia mallei BMQ
Pathway
bmaq02024  Quorum sensing
bmaq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bmaq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DM76_3111 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    DM76_3111 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bmaq03019]
    DM76_3111 (hfq)
   03036 Chromosome and associated proteins [BR:bmaq03036]
    DM76_3111 (hfq)
Messenger RNA biogenesis [BR:bmaq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     DM76_3111 (hfq)
Chromosome and associated proteins [BR:bmaq03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    DM76_3111 (hfq)
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: AIO63955
LinkDB
Position
1:3425178..3425789
AA seq 203 aa
MANPAESHPQNDFINAARKERKRVEIYLVNGIRLTGCIESFDQYLVMLRTPVGLQGIYKR
AISTIQLDTGGSRPGGRGPRAGGAHGGGGRPGGREGGGHGPYGSHGGSREPRGDGGGYGA
RESRGDGGYGSRESRGDGGYGSREPRGDGGYGAREPREPREPRESYGAPQEGASTPSGTQ
ERNGNGPVIVTRRRRSLGPTDGQ
NT seq 612 nt   +upstreamnt  +downstreamnt
atggccaatcctgcagaatcccatccgcaaaacgacttcatcaatgccgcgcgcaaggaa
cgcaagcgcgtcgaaatttatctcgtcaacggtattcgactgacgggttgcatcgagtcg
ttcgaccagtatctggtgatgctgcgcacgcccgtcggcctgcaaggcatctataaacgc
gccatctcgacgatccagctcgacacgggcggctcccgtccgggcggacgcggcccgcgc
gcgggcggcgcccacggcggcggcggacgccccggcggacgcgaaggcggcggtcatggc
ccgtacggctcgcacggcggctcgcgcgaaccccgcggcgacggcggcggctatggcgct
cgcgaatcgcgcggcgacggcggttatggctcccgcgaatcgcgcggcgacggcggctac
ggttcccgcgaaccgcgtggcgacggcggctatggcgcgcgcgagccgcgtgaaccgcgc
gagccccgcgagtcttacggcgcgccgcaagaaggcgcatcgacgccgtccggcacgcag
gaacgcaacggcaacggcccggtgatcgtcacgcgccgtcgccgttcgctcggcccgacc
gacggccaataa

DBGET integrated database retrieval system