Burkholderia mallei BMQ: DM76_3111
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Entry
DM76_3111 CDS
T03490
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
bmaq
Burkholderia mallei BMQ
Pathway
bmaq02024
Quorum sensing
bmaq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmaq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DM76_3111 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DM76_3111 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmaq03019
]
DM76_3111 (hfq)
03036 Chromosome and associated proteins [BR:
bmaq03036
]
DM76_3111 (hfq)
Messenger RNA biogenesis [BR:
bmaq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
DM76_3111 (hfq)
Chromosome and associated proteins [BR:
bmaq03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
DM76_3111 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Motif
Other DBs
NCBI-ProteinID:
AIO63955
LinkDB
All DBs
Position
1:3425178..3425789
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AA seq
203 aa
AA seq
DB search
MANPAESHPQNDFINAARKERKRVEIYLVNGIRLTGCIESFDQYLVMLRTPVGLQGIYKR
AISTIQLDTGGSRPGGRGPRAGGAHGGGGRPGGREGGGHGPYGSHGGSREPRGDGGGYGA
RESRGDGGYGSRESRGDGGYGSREPRGDGGYGAREPREPREPRESYGAPQEGASTPSGTQ
ERNGNGPVIVTRRRRSLGPTDGQ
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcctgcagaatcccatccgcaaaacgacttcatcaatgccgcgcgcaaggaa
cgcaagcgcgtcgaaatttatctcgtcaacggtattcgactgacgggttgcatcgagtcg
ttcgaccagtatctggtgatgctgcgcacgcccgtcggcctgcaaggcatctataaacgc
gccatctcgacgatccagctcgacacgggcggctcccgtccgggcggacgcggcccgcgc
gcgggcggcgcccacggcggcggcggacgccccggcggacgcgaaggcggcggtcatggc
ccgtacggctcgcacggcggctcgcgcgaaccccgcggcgacggcggcggctatggcgct
cgcgaatcgcgcggcgacggcggttatggctcccgcgaatcgcgcggcgacggcggctac
ggttcccgcgaaccgcgtggcgacggcggctatggcgcgcgcgagccgcgtgaaccgcgc
gagccccgcgagtcttacggcgcgccgcaagaaggcgcatcgacgccgtccggcacgcag
gaacgcaacggcaacggcccggtgatcgtcacgcgccgtcgccgttcgctcggcccgacc
gacggccaataa
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