KEGG   Brassica napus (rape): 106371506Help
Entry
106371506         CDS       T04128                                 

Definition
(RefSeq) DNA ligase 4 isoform X1
  KO
K10777  
DNA ligase 4 [EC:6.5.1.1]
Organism
bna  Brassica napus (rape)
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:bna00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    106371506
Enzymes [BR:bna01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     106371506
DNA repair and recombination proteins [BR:bna03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     106371506
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
LinkDB All DBs
AA seq 1196 aa AA seqDB search
MTEEIKLSVLVSLFNWIQKSKTSSQKRSKFRKFLDTYCKPSDYFSAVRLIIPSLDRERGS
YGLKESVLATCLIDALGISRDAPDAVRLLNWRKGGTAKAGANAGNFSLIAAEVLQRRQGM
ASGGLSVKELNDLLDRLASSENRGEKTCVLSTLIQKTNAQEMKWVIRIILKDLKLGMSER
SIFQEFHPDAEDLFNVTCDLKLVCEKLRDRHQRHKRQDIEVGKAVRPQLAMRISDVNAAW
KKLHGKDVVAECKFDGDRIQIHKNGSEIHYFSRNFLDHSEYAHAMSDLIVQNIMADKCIL
DGEMLVWDTSLNRFAEFGSNQEIAKAAREGLDSHRQLCYVAFDVLYVGDTSVIHQSLKER
HELLRKVVKPLKGRLEVLVPEGGLNVHRPSGEPSWSIVVHSAADVERFFKETVENRDEGV
VLKDLGSKWEPGDRSGKWLKLKPEYVRAGSDLDVLIIGGYYGSGRHGGEVAQFLVGLADR
AETNVYPRRFMSFCRVGTGLSDEELNTVVSKLKPYFRKNEQPKKAPPSFYQVTNHSKERP
DVWIESPEKSIILSITSDIRTIRSEVFVAPYSLRFPRIDKVRYDKPWHECLDVQSFVELV
NSSNGTTQKQKESESTQDNPKVIKTSKRGGEKKNVSLVPSQFIQTDVSDIKGKTSIFSNM
IFYFVNLPRSHSLDTFHKMVVENGGKFSMNLNNSVTHCIAAESSGIKYQAAKRQRDVIHF
SWVLDCCSRNNLLPLQPKYFLHLTDASRTKLQDEIDEFSDSYFFDLDLEGLKQVLSNAKQ
SEDSKSIECYKKKLCPEKRWSCFIGCCIYFHLYSETLSIEEEALLGIMAKRLALEVLMGG
GKVSNNLAHASHLVVLALTEDSLDFTSVSKSFSEKEKRLLMKRRLHVVNSNWLEDSLQRE
QKLSEEVYTLRPKSMEESDTEESDKSEHDTTEVASGGRAQTEEPASSKLATTSSRGRSST
RAGNKRGRSSTNSVKRVQRRRGKQPSKIGGSETEESDAASEEKAATRLSDDIAEDSDDAQ
RNSRRGRSAKRGKSRVAQPQRVQRPRRGKKPLKIGGDDSEENDDFDDKKNDSADEAKHRE
SLERDNTVSVEEASSQDSRNAKTEMDREEKIQIHEDPLQAMLMNMIPSLTLRNTSRTGEA
STANVCGESESSEKRKLGAETDNACVKNAEADEVPPPVKKKKVSYRDVAGELLKDW
NT seq 3591 nt NT seq  +upstreamnt  +downstreamnt
atgacggaggagatcaaactcagcgtactagtgtctctcttcaactggattcagaagagc
aaaacctcatcccagaaacgctccaagttccgcaagttcctcgacacctactgcaaaccc
tccgattacttctccgccgtgcgtctcatcatcccgtcgctcgaccgagagcgaggcagc
tacggcctcaaggagtctgtgctcgccacgtgtctcatcgacgccctcggaatctctcgc
gatgctcccgacgcggttcgccttctcaattggcgcaaaggaggaaccgctaaggctgga
gccaacgccggaaacttctccttaattgctgctgaggtgctgcaacgtaggcaagggatg
gcgtctggtgggttgagtgttaaggagttgaatgatttgcttgatcgtttggcttcgagt
gagaacagaggggagaagacttgtgttctttctacgctgattcagaagacgaatgcacag
gagatgaagtgggtcattaggatcattcttaaagatttgaagctggggatgagcgagagg
agtatttttcaggagttccatccagatgctgaggacttgtttaatgtcacatgtgacttg
aaactagtctgtgaaaagctcagggatcgccaccaacgtcacaagcgccaggatatagaa
gttggaaaagctgtacgaccccagttagctatgcgtatcagtgacgtaaatgctgcttgg
aagaagctccatgggaaagatgtagttgctgagtgcaaatttgatggggatcgcatacag
atacacaaaaatgggtctgagatacattacttctctaggaacttccttgaccattctgaa
tatgcacatgccatgtcggatcttatcgtacaaaatataatggctgacaagtgtatcctt
gatggtgaaatgttggtttgggatacatcacttaatcggtttgctgagtttggttctaat
caggaaatagccaaagcagcaagggagggtctcgacagccatagacagttatgttatgtt
gcctttgatgtgctttatgttggcgatactagcgtcatccaccagagtttaaaagaacgg
catgaactcctgaggaaagtggttaagcctttaaaaggccggcttgaagttctagtgccc
gaaggtggtctcaatgttcatcgcccttctggggaaccaagttggtctattgtggttcat
tctgcagctgatgttgagcggtttttcaaagaaacagttgaaaatagggatgaaggagtt
gtgcttaaagatctgggatcgaaatgggaacctggagatcgtagtggcaagtggttgaag
ttgaagcctgaatatgtccgggctggttctgatctagatgttcttataataggaggatac
tatggctctggccgtcacggaggagaggtagcacagtttctcgttgggttggctgaccgg
gcagagacaaatgtgtatcccaggcgatttatgtcgttttgtagagttggcacaggacta
tctgatgaagagcttaacactgttgtaagcaaactgaagccttatttcagaaaaaacgaa
cagccaaagaaggctccaccaagcttttatcaggtcacaaatcactcaaaagagagacct
gatgtttggatcgaaagcccggaaaaatcaataatactctccatcactagtgacatcagg
acaataaggtctgaggtttttgtggcaccttacagcctgaggtttcctcgtattgataaa
gtaagatacgacaaaccttggcacgagtgtctggatgtgcaatcttttgtggaattggtg
aactcgagtaacggcaccacacagaaacaaaaggaatccgaaagcactcaggacaatcca
aaagtcattaaaacctccaagagaggaggagagaaaaagaatgtgtctcttgtcccatct
cagtttattcagactgatgtatcggatatcaagggcaagacctcaatcttctccaatatg
atattttattttgtaaacctgcctcggtcccattctcttgatacattccacaaaatggtg
gttgagaatggagggaagttctcaatgaacttaaacaattctgtgactcattgcattgca
gcggaaagcagtggaataaagtatcaggcagcaaaacgtcaaagagatgtcatccacttt
tcatgggtcttagattgttgttcacggaataatcttcttccgttgcagccaaagtacttc
ctccatctcactgatgcttcaaggaccaaattacaggatgaaattgacgagttttccgat
tcttatttctttgatttagaccttgaaggtctcaaacaggtcttgagcaatgctaagcaa
tcggaagactcaaaatccattgaatgctacaagaaaaagctatgtccggagaaaagatgg
tcctgcttcatcggttgctgcatttactttcacctctatagtgaaacactgagtattgaa
gaggaagctctgttgggaatcatggctaagagattagcgcttgaagtcttaatgggaggt
ggtaaagtcagcaataatcttgctcatgcgtctcaccttgtagtccttgctttaacagaa
gactctttggattttacttcagtttcaaaaagtttcagcgaaaaggagaaacgtcttttg
atgaagagaaggctacatgttgttaactcgaactggttagaggacagtttgcaaagagag
caaaaactaagcgaggaggtgtacactctgaggcctaagagtatggaagagtctgatact
gaagaatcagataaatctgaacatgatacaacggaagtagcttctggtggtagggctcaa
actgaagagccagcttcctctaaattggcaactacgagttcaagaggacggtcaagtact
cgagctggtaataaaaggggaaggtcttctacaaactcagtgaaacgagtacagagacgc
agaggcaagcagccttctaagataggtggaagtgaaacagaggagagtgatgcggcttcg
gaagaaaaggctgcaacaagactcagtgatgatatagcagaagactctgatgatgctcaa
agaaactccaggagaggaagatctgcaaagagagggaagtctcgtgtggcacaaccccaa
agagtacagagaccaagaagaggcaagaagcctttgaagataggaggagatgactctgag
gaaaacgatgattttgatgacaagaaaaatgattccgcggacgaggcaaagcacagagaa
tcactggagagagataacacagtatcagttgaagaggcctcctcgcaagattctagaaat
gcaaagaccgagatggatagggaagagaagatacaaatccatgaggatccattacaagct
atgttgatgaacatgatcccaagcctcactctgagaaacacaagccgaacgggcgaagct
agtacggctaatgtttgtggtgagagtgagtcttcagagaaaagaaaacttggcgccgag
actgataatgcttgtgtgaagaacgcagaggcagatgaagttcctcctcctgtgaagaaa
aagaaagttagctaccgcgatgttgccggagaactgctcaaggactggtga

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